Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 HSPD1P4-201ENST00000547203 1702 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AC027575.3-201ENST00000583058 2747 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC007406.5-201ENST00000570140 3170 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC010132.2-201ENST00000295493 1043 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 FAM32BP-201ENST00000344033 333 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 SNORA51.9-201ENST00000384295 124 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 RNU6-310P-201ENST00000384655 107 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 SNORD115.1-201ENST00000391109 76 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 RNU2-38P-201ENST00000410856 79 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 HMGN1P20-201ENST00000411849 300 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC068138.1-201ENST00000412635 217 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AL590135.1-201ENST00000422215 156 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC023347.2-201ENST00000433994 462 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 FTH1P16-201ENST00000435241 552 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC098831.1-201ENST00000440661 216 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC104651.2-201ENST00000447549 528 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 SNORD127-201ENST00000458892 86 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 RPL12P31-201ENST00000478433 450 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC022415.1-202ENST00000486612 523 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 OR4D12P-201ENST00000509361 911 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 FAM206BP-201ENST00000510179 541 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 Y_RNA.673-201ENST00000516306 88 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 RNU6-1088P-201ENST00000516850 104 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC022360.1-201ENST00000521058 340 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 DEFB131D-201ENST00000526803 184 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 SLC2A13P1-201ENST00000531560 322 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 HMGB1P6-201ENST00000569046 646 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AL157899.1-201ENST00000604110 936 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC020765.1-201ENST00000604296 328 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 RNU6-87P-201ENST00000607561 108 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 SNORA74.4-201ENST00000607595 199 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC130324.3-201ENST00000614165 542 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC024884.1-201ENST00000620583 399 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC119674.1-212ENST00000641155 993 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 VPS35P1-201ENST00000563400 1518 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 AC241584.2-201ENST00000637142 2090 ntBASIC6.69□□□□□ -1.34
NPAS3Q8IXF0 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC127070.3-201ENST00000503695 3263 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 DBF4P1-201ENST00000412976 1892 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms