Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 EOGT-210ENST00000615922 1931 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC135352.1-201ENST00000506173 1418 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC026951.1-201ENST00000559530 2459 ntBASIC4.71□□□□□ -1.65
PRPF39Q86UA1 Z73965.1-201ENST00000623412 2297 ntBASIC4.71□□□□□ -1.65
PRPF39Q86UA1 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 RNA5SP151-201ENST00000365632 117 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 RNU6-207P-201ENST00000384137 107 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 MIR921-201ENST00000401133 56 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 Z98745.1-201ENST00000402553 494 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 RNU6-77P-201ENST00000410554 91 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 RN7SKP167-201ENST00000411047 285 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 GAPDHP49-201ENST00000421421 961 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 RPL21P43-201ENST00000425440 472 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 AP001324.1-201ENST00000428553 399 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 RPL23AP1-201ENST00000428990 471 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 AC073587.1-201ENST00000447093 876 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 OR51B8P-201ENST00000449892 769 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 Z95152.1-201ENST00000453556 656 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 RPS23P7-201ENST00000466210 444 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 STMN1P2-201ENST00000508435 439 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 AC008885.2-201ENST00000509506 930 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 CYCSP28-201ENST00000534284 321 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 MIR4277-201ENST00000578298 84 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 AC009948.4-201ENST00000604692 675 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 XPOTP1-201ENST00000443317 2398 ntBASIC4.71□□□□□ -1.66
PRPF39Q86UA1 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
PRPF39Q86UA1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 ZNF137P-201ENST00000456718 1920 ntBASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AL592148.3-201ENST00000608771 2646 ntBASIC4.7□□□□□ -1.66
PRPF39Q86UA1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AC016716.1-201ENST00000265882 708 ntBASIC4.7□□□□□ -1.66
PRPF39Q86UA1 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 MIR129-1-201ENST00000384972 72 ntBASIC4.7□□□□□ -1.66
PRPF39Q86UA1 RNU6-932P-201ENST00000391108 106 ntBASIC4.7□□□□□ -1.66
PRPF39Q86UA1 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 CYCSP10-201ENST00000417973 294 ntBASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AC013262.1-201ENST00000426710 252 ntBASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AC015724.1-201ENST00000478577 156 ntBASIC4.7□□□□□ -1.66
PRPF39Q86UA1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AC005014.3-201ENST00000605985 190 ntBASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AC006927.2-201ENST00000639256 389 ntBASIC4.7□□□□□ -1.66
PRPF39Q86UA1 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PRPF39Q86UA1 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 OR56B2P-202ENST00000641377 2453 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms