Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.55□□□□□ -2
CSMD3Q7Z407 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CSMD3Q7Z407 AL136131.1-201ENST00000406079 803 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC2.55□□□□□ -2
CSMD3Q7Z407 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC2.55□□□□□ -2
CSMD3Q7Z407 AC093663.1-201ENST00000497190 394 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC2.55□□□□□ -2
CSMD3Q7Z407 AC023141.12-201ENST00000512399 199 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 AC011611.1-201ENST00000552179 197 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.55□□□□□ -2
CSMD3Q7Z407 AC005344.1-201ENST00000613391 459 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 AC024341.1-201ENST00000526444 1552 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC2.55□□□□□ -2
CSMD3Q7Z407 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 AC005332.5-201ENST00000591222 2919 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC2.54□□□□□ -2
CSMD3Q7Z407 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC2.54□□□□□ -2
CSMD3Q7Z407 AC006484.1-201ENST00000435086 1884 ntBASIC2.54□□□□□ -2
CSMD3Q7Z407 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CSMD3Q7Z407 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CSMD3Q7Z407 AL132656.3-201ENST00000606384 1595 ntBASIC2.54□□□□□ -2
CSMD3Q7Z407 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC2.54□□□□□ -2
CSMD3Q7Z407 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC2.54□□□□□ -2
CSMD3Q7Z407 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
CSMD3Q7Z407 AL121576.1-201ENST00000556055 276 ntBASIC2.54□□□□□ -2
CSMD3Q7Z407 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC2.54□□□□□ -2
CSMD3Q7Z407 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CSMD3Q7Z407 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.54□□□□□ -2
CSMD3Q7Z407 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC2.54□□□□□ -2
CSMD3Q7Z407 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CSMD3Q7Z407 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CSMD3Q7Z407 BX323014.1-201ENST00000412876 237 ntBASIC2.54□□□□□ -2
CSMD3Q7Z407 OR2AH1P-201ENST00000425717 928 ntBASIC2.54□□□□□ -2
CSMD3Q7Z407 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC2.54□□□□□ -2
CSMD3Q7Z407 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC2.54□□□□□ -2
CSMD3Q7Z407 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC2.54□□□□□ -2
CSMD3Q7Z407 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC2.54□□□□□ -2
CSMD3Q7Z407 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.54□□□□□ -2
CSMD3Q7Z407 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC2.54□□□□□ -2
CSMD3Q7Z407 AC104984.5-201ENST00000586878 94 ntBASIC2.54□□□□□ -2
CSMD3Q7Z407 AC234782.5-201ENST00000617723 324 ntBASIC2.54□□□□□ -2
CSMD3Q7Z407 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CSMD3Q7Z407 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC2.54□□□□□ -2
CSMD3Q7Z407 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CSMD3Q7Z407 CROT-204ENST00000442291 1993 ntTSL 5 BASIC2.54□□□□□ -2
CSMD3Q7Z407 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CSMD3Q7Z407 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CSMD3Q7Z407 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
CSMD3Q7Z407 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CSMD3Q7Z407 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.54□□□□□ -2
CSMD3Q7Z407 RNF19BPX-201ENST00000426224 625 ntBASIC2.54□□□□□ -2
CSMD3Q7Z407 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC2.54□□□□□ -2
CSMD3Q7Z407 PRELID3BP10-201ENST00000431957 584 ntBASIC2.54□□□□□ -2
CSMD3Q7Z407 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.54□□□□□ -2
CSMD3Q7Z407 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.54□□□□□ -2
CSMD3Q7Z407 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.54□□□□□ -2
CSMD3Q7Z407 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.54□□□□□ -2
CSMD3Q7Z407 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC2.54□□□□□ -2
CSMD3Q7Z407 AC091544.4-201ENST00000555268 342 ntBASIC2.54□□□□□ -2
CSMD3Q7Z407 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.54□□□□□ -2
CSMD3Q7Z407 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.54□□□□□ -2
CSMD3Q7Z407 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.54□□□□□ -2
CSMD3Q7Z407 AC009464.1-201ENST00000615731 469 ntBASIC2.54□□□□□ -2
CSMD3Q7Z407 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.54□□□□□ -2
CSMD3Q7Z407 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.54□□□□□ -2
CSMD3Q7Z407 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CSMD3Q7Z407 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC2.54□□□□□ -2
CSMD3Q7Z407 PHACTR2P1-201ENST00000605639 1414 ntBASIC2.54□□□□□ -2
CSMD3Q7Z407 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC2.54□□□□□ -2
CSMD3Q7Z407 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CSMD3Q7Z407 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CSMD3Q7Z407 AC067945.1-201ENST00000342609 618 ntBASIC2.53□□□□□ -2
CSMD3Q7Z407 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.53□□□□□ -2
CSMD3Q7Z407 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC2.53□□□□□ -2
CSMD3Q7Z407 MKKS-203ENST00000609375 882 ntTSL 2 BASIC2.53□□□□□ -2
CSMD3Q7Z407 AC097505.1-201ENST00000610199 565 ntBASIC2.53□□□□□ -2
CSMD3Q7Z407 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CSMD3Q7Z407 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CSMD3Q7Z407 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CSMD3Q7Z407 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC2.53□□□□□ -2
CSMD3Q7Z407 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CSMD3Q7Z407 SNORD9-201ENST00000362566 104 ntBASIC2.53□□□□□ -2
CSMD3Q7Z407 RPS29P4-201ENST00000414733 161 ntBASIC2.53□□□□□ -2
CSMD3Q7Z407 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.53□□□□□ -2
CSMD3Q7Z407 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.53□□□□□ -2
CSMD3Q7Z407 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.53□□□□□ -2
CSMD3Q7Z407 AC016839.1-201ENST00000578162 867 ntBASIC2.53□□□□□ -2
CSMD3Q7Z407 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.53□□□□□ -2
CSMD3Q7Z407 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
CSMD3Q7Z407 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC2.53□□□□□ -2
CSMD3Q7Z407 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms