Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC004825.2-201ENST00000616634 455 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC013437.2-201ENST00000639587 677 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AL442639.1-201ENST00000625030 1899 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AL645568.2-201ENST00000432815 1337 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC073429.2-201ENST00000569694 1444 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AL136164.3-201ENST00000624429 3978 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 MIR298-201ENST00000401212 88 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 PRRC2CP1-201ENST00000404428 159 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 RPL23AP48-201ENST00000406913 488 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AL603766.1-201ENST00000407763 664 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 RN7SKP267-201ENST00000410381 285 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 RSU1P3-201ENST00000412878 835 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 RPS15AP40-201ENST00000419621 391 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 MTND2P9-201ENST00000422293 931 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AC016831.4-201ENST00000438302 307 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AC009263.1-201ENST00000441193 1239 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 RPL37P6-202ENST00000464216 403 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AC006967.1-201ENST00000467608 589 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AC126121.1-201ENST00000482313 553 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AC091868.1-201ENST00000508746 304 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 PTGES3P3-201ENST00000511479 482 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 OR7H2P-201ENST00000513483 306 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 Vault.1-201ENST00000516474 102 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AC113194.1-201ENST00000606037 500 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 SNORD91B-202ENST00000608459 222 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AC018926.3-201ENST00000618841 406 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AC090772.4-201ENST00000623599 362 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 DCAF13P1-201ENST00000495256 1330 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 AL627171.1-201ENST00000618845 1308 ntBASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP54Q7Z3B4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AC125257.1-201ENST00000560400 2930 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 UBBP2-201ENST00000376781 231 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 MIR122-201ENST00000385044 85 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 RNU1-82P-201ENST00000390851 165 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AL592291.1-201ENST00000403830 352 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 VN1R51P-201ENST00000411675 945 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 VDAC1P9-201ENST00000412766 841 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AL591848.1-201ENST00000413092 322 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 TCEA1P2-201ENST00000420496 906 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 E2F6P2-201ENST00000420708 748 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AP001324.1-201ENST00000428553 399 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AL050341.1-201ENST00000447743 313 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 RPL21P71-201ENST00000465598 459 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms