Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS13CQ709C8 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS13CQ709C8 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS13CQ709C8 HMGN2P27-201ENST00000427352 270 ntBASIC2.93□□□□□ -1.94
VPS13CQ709C8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS13CQ709C8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS13CQ709C8 AC011503.2-201ENST00000594230 1500 ntBASIC2.93□□□□□ -1.94
VPS13CQ709C8 AC073657.2-201ENST00000605661 303 ntBASIC2.93□□□□□ -1.94
VPS13CQ709C8 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS13CQ709C8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
VPS13CQ709C8 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VPS13CQ709C8 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
VPS13CQ709C8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS13CQ709C8 MIR1271-201ENST00000408537 86 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 RN7SKP97-201ENST00000410966 333 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 RPS15AP29-201ENST00000445539 400 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 MIR3162-201ENST00000581818 82 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 AC107993.1-201ENST00000591343 684 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 MIR7702-201ENST00000621931 59 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 AL392088.2-201ENST00000637607 285 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VPS13CQ709C8 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VPS13CQ709C8 ZNF807-201ENST00000328088 1707 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VPS13CQ709C8 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 CEP170P1-201ENST00000502249 4587 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 BX842559.1-201ENST00000419615 532 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 VN1R104P-201ENST00000505115 1009 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 IGLV3-26-201ENST00000520756 302 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 AP000553.6-201ENST00000641242 118 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VPS13CQ709C8 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
VPS13CQ709C8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VPS13CQ709C8 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VPS13CQ709C8 NDUFB1P1-201ENST00000435191 180 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 RPL7P59-201ENST00000447700 943 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 VN1R40P-201ENST00000455196 941 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 RPL7P38-201ENST00000488396 739 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 AC104984.5-201ENST00000586878 94 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
VPS13CQ709C8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 PHACTR2P1-201ENST00000605639 1414 ntBASIC2.92□□□□□ -1.94
VPS13CQ709C8 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VPS13CQ709C8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VPS13CQ709C8 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS13CQ709C8 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 RNA5SP229-201ENST00000410809 99 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS13CQ709C8 RAB28P3-201ENST00000448325 597 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.91□□□□□ -1.94
VPS13CQ709C8 TRAV15-201ENST00000556680 249 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 AP003355.3-201ENST00000623465 114 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 Z95327.2-201ENST00000414579 1873 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 AL132656.3-201ENST00000606384 1595 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 RNU4-82P-201ENST00000362443 140 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 RNU1-70P-201ENST00000362618 164 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.91□□□□□ -1.94
VPS13CQ709C8 SETP9-201ENST00000423837 832 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 KCTD9P3-201ENST00000434597 1169 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC2.91□□□□□ -1.94
VPS13CQ709C8 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS13CQ709C8 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC2.91□□□□□ -1.94
VPS13CQ709C8 SNORA62.6-201ENST00000606322 83 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 AL162274.2-201ENST00000614406 332 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC2.91□□□□□ -1.94
VPS13CQ709C8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
VPS13CQ709C8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 HMGN1P24-201ENST00000412282 298 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 SDCBPP2-201ENST00000424643 885 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 AC000041.1-201ENST00000439655 175 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 AC010095.1-201ENST00000443543 144 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 AC090602.1-201ENST00000469695 252 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.91□□□□□ -1.94
VPS13CQ709C8 RNA5SP341-201ENST00000516261 117 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms