Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 DNAJC19P7-201ENST00000428811 344 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 IFNWP4-201ENST00000453148 294 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 SCARNA10-201ENST00000459255 330 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 FTH1P24-201ENST00000503502 462 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 SUMO2P5-201ENST00000506790 245 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 RN7SKP96-201ENST00000516948 297 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 C1GALT1P3-201ENST00000522049 819 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 AP000827.1-201ENST00000527814 258 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 SERPINE4P-201ENST00000554978 281 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 MIR4715-201ENST00000584117 79 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 AP003117.1-201ENST00000602771 554 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 AL133338.2-201ENST00000604292 736 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 Z82195.1-201ENST00000604558 398 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 AL392112.1-201ENST00000605115 829 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 AC018754.1-201ENST00000607486 925 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 AC135352.1-201ENST00000506173 1418 ntBASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX30Q5VWJ9 MAPK10-320ENST00000641462 6696 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 RNU1-87P-201ENST00000363727 170 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC092638.1-201ENST00000411966 1275 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 MTND2P15-201ENST00000418575 892 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 UQCRBP1-201ENST00000421129 336 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 RPS26P30-201ENST00000443431 335 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 HMGB1P48-201ENST00000446155 598 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC104651.2-201ENST00000447549 528 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC233982.1-201ENST00000451247 436 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 MTATP6P14-201ENST00000455189 673 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 RNU7-140P-201ENST00000459546 60 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 RN7SL481P-201ENST00000477764 299 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC015724.1-201ENST00000478577 156 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 RN7SL817P-201ENST00000480777 288 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 STMN1P2-201ENST00000508435 439 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC010374.2-201ENST00000512933 535 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 RAB9BP1-201ENST00000519581 626 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC104417.1-201ENST00000523974 751 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC138701.1-201ENST00000524329 714 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC118942.1-201ENST00000529674 1035 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 RPL21P7-201ENST00000557463 483 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC087477.6-201ENST00000559595 843 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC090515.3-201ENST00000560431 315 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 ZNF971P-201ENST00000562068 1249 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC084783.1-201ENST00000565846 910 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC090312.1-201ENST00000580637 348 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 BNIP3P39-201ENST00000601077 554 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC091488.1-201ENST00000604239 660 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AC091979.2-201ENST00000607514 214 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 AL121594.5-201ENST00000631724 573 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 BX649567.1-201ENST00000642071 1134 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 SAGE2P-201ENST00000420011 2126 ntBASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX30Q5VWJ9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SNX30Q5VWJ9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SNX30Q5VWJ9 AL592437.2-201ENST00000421655 2434 ntBASIC4.84□□□□□ -1.63
SNX30Q5VWJ9 AL359922.3-201ENST00000624779 1670 ntBASIC4.84□□□□□ -1.63
SNX30Q5VWJ9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX30Q5VWJ9 AC025263.3-201ENST00000622965 1396 ntBASIC4.84□□□□□ -1.63
SNX30Q5VWJ9 AC021146.4-201ENST00000309229 279 ntBASIC4.84□□□□□ -1.63
SNX30Q5VWJ9 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms