Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.89□□□□□ -1.95
CKS1BP61024 SNRPFP1-201ENST00000414761 252 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 LIPT1P1-201ENST00000415870 1186 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC2.89□□□□□ -1.95
CKS1BP61024 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC2.89□□□□□ -1.95
CKS1BP61024 DPPA2P1-201ENST00000428060 556 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 AC087650.1-201ENST00000431445 468 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 HMGN2P20-201ENST00000437531 273 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC2.89□□□□□ -1.95
CKS1BP61024 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CKS1BP61024 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC2.89□□□□□ -1.95
CKS1BP61024 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC2.89□□□□□ -1.95
CKS1BP61024 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.89□□□□□ -1.95
CKS1BP61024 AC104308.1-201ENST00000454621 333 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 ARPC3P2-201ENST00000457786 533 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 AC091179.1-201ENST00000461606 579 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CKS1BP61024 AC006517.1-201ENST00000480485 328 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 RPS4XP13-201ENST00000483219 789 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.89□□□□□ -1.95
CKS1BP61024 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.89□□□□□ -1.95
CKS1BP61024 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.89□□□□□ -1.95
CKS1BP61024 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.89□□□□□ -1.95
CKS1BP61024 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.89□□□□□ -1.95
CKS1BP61024 TRAV8-5-201ENST00000537369 341 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC2.89□□□□□ -1.95
CKS1BP61024 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC2.89□□□□□ -1.95
CKS1BP61024 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC2.89□□□□□ -1.95
CKS1BP61024 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CKS1BP61024 AC005951.1-201ENST00000576706 485 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 MIR4474-201ENST00000579189 78 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 AC091042.1-201ENST00000579213 173 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.89□□□□□ -1.95
CKS1BP61024 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.89□□□□□ -1.95
CKS1BP61024 AL161729.3-201ENST00000603533 673 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 AC005034.4-201ENST00000603612 899 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 AC009948.4-201ENST00000604692 675 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 AC016877.3-201ENST00000606778 504 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 RMST_8.1-201ENST00000610287 165 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CKS1BP61024 AC022079.2-201ENST00000619739 566 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 AC110774.1-201ENST00000623567 2018 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC2.89□□□□□ -1.95
CKS1BP61024 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC2.89□□□□□ -1.95
CKS1BP61024 FP325313.1-201ENST00000638228 703 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 OR2L1P-202ENST00000641567 1023 ntBASIC2.89□□□□□ -1.95
CKS1BP61024 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CKS1BP61024 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CKS1BP61024 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CKS1BP61024 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC2.89□□□□□ -1.95
CKS1BP61024 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.88□□□□□ -1.95
CKS1BP61024 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CKS1BP61024 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CKS1BP61024 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CKS1BP61024 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CKS1BP61024 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
CKS1BP61024 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CKS1BP61024 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CKS1BP61024 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CKS1BP61024 RNU6-697P-201ENST00000363348 107 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 RNU6-356P-201ENST00000384140 107 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 SNORA51.8-201ENST00000384234 132 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 RNU6ATAC5P-201ENST00000388104 126 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CKS1BP61024 MIR1179-201ENST00000408703 91 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 AC013404.1-201ENST00000413068 249 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CKS1BP61024 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC2.88□□□□□ -1.95
CKS1BP61024 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.88□□□□□ -1.95
CKS1BP61024 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CKS1BP61024 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.88□□□□□ -1.95
CKS1BP61024 AC004074.1-201ENST00000421810 1063 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 RPL7P46-201ENST00000425129 740 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC2.88□□□□□ -1.95
CKS1BP61024 AC011998.1-201ENST00000433403 117 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 HMGB1P12-201ENST00000438594 598 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.88□□□□□ -1.95
CKS1BP61024 AC114495.1-201ENST00000441274 436 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CKS1BP61024 PPIAP20-201ENST00000449839 135 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.88□□□□□ -1.95
CKS1BP61024 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.88□□□□□ -1.95
CKS1BP61024 AC009963.2-201ENST00000453431 138 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 RNU6ATAC28P-201ENST00000459249 118 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 RPL7P22-201ENST00000466005 733 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 RPL35AP15-201ENST00000468042 339 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 AC093267.1-201ENST00000489176 961 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 AC011005.3-201ENST00000491624 395 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC2.88□□□□□ -1.95
CKS1BP61024 AC108145.1-201ENST00000503770 153 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.88□□□□□ -1.95
CKS1BP61024 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC2.88□□□□□ -1.95
CKS1BP61024 CDV3-208ENST00000511392 554 ntTSL 5 BASIC2.88□□□□□ -1.95
CKS1BP61024 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC2.88□□□□□ -1.95
CKS1BP61024 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC2.88□□□□□ -1.95
CKS1BP61024 SYF2P1-201ENST00000550658 413 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 OR4H12P-201ENST00000556269 907 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC2.88□□□□□ -1.95
CKS1BP61024 AC105129.1-201ENST00000560250 297 ntBASIC2.88□□□□□ -1.95
CKS1BP61024 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms