Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC008628.1-201ENST00000508663 265 ntBASIC3.9□□□□□ -1.79
LIM2P55344 SNORA31.13-201ENST00000516624 135 ntBASIC3.9□□□□□ -1.79
LIM2P55344 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LIM2P55344 HAUS1P3-201ENST00000523909 662 ntBASIC3.9□□□□□ -1.79
LIM2P55344 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.9□□□□□ -1.79
LIM2P55344 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.9□□□□□ -1.79
LIM2P55344 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.9□□□□□ -1.79
LIM2P55344 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.9□□□□□ -1.79
LIM2P55344 AC025884.1-201ENST00000556034 378 ntBASIC3.9□□□□□ -1.79
LIM2P55344 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.9□□□□□ -1.79
LIM2P55344 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
LIM2P55344 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.9□□□□□ -1.79
LIM2P55344 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.9□□□□□ -1.79
LIM2P55344 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.9□□□□□ -1.79
LIM2P55344 OR1AB1P-201ENST00000585564 761 ntBASIC3.9□□□□□ -1.79
LIM2P55344 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.9□□□□□ -1.79
LIM2P55344 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.9□□□□□ -1.79
LIM2P55344 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.9□□□□□ -1.79
LIM2P55344 AC011374.2-201ENST00000607135 526 ntBASIC3.9□□□□□ -1.79
LIM2P55344 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.9□□□□□ -1.79
LIM2P55344 MIR7151-201ENST00000617477 60 ntBASIC3.9□□□□□ -1.79
LIM2P55344 AP005264.7-201ENST00000625003 745 ntBASIC3.9□□□□□ -1.79
LIM2P55344 FRG1DP-201ENST00000635586 771 ntBASIC3.9□□□□□ -1.79
LIM2P55344 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LIM2P55344 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LIM2P55344 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LIM2P55344 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LIM2P55344 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LIM2P55344 MTND5P11-201ENST00000511037 1812 ntBASIC3.9□□□□□ -1.79
LIM2P55344 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
LIM2P55344 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LIM2P55344 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LIM2P55344 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
LIM2P55344 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.89□□□□□ -1.79
LIM2P55344 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
LIM2P55344 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIM2P55344 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LIM2P55344 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.89□□□□□ -1.79
LIM2P55344 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LIM2P55344 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.89□□□□□ -1.79
LIM2P55344 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIM2P55344 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.89□□□□□ -1.79
LIM2P55344 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.89□□□□□ -1.79
LIM2P55344 AC090971.4-201ENST00000560291 1800 ntBASIC3.89□□□□□ -1.79
LIM2P55344 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
LIM2P55344 RNU6-252P-201ENST00000363232 107 ntBASIC3.89□□□□□ -1.79
LIM2P55344 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIM2P55344 RNU2-72P-201ENST00000411175 163 ntBASIC3.89□□□□□ -1.79
LIM2P55344 UBE2V1P11-201ENST00000411559 285 ntBASIC3.89□□□□□ -1.79
LIM2P55344 AC013404.1-201ENST00000413068 249 ntBASIC3.89□□□□□ -1.79
LIM2P55344 XKRYP4-201ENST00000414395 483 ntBASIC3.89□□□□□ -1.79
LIM2P55344 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.89□□□□□ -1.79
LIM2P55344 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.89□□□□□ -1.79
LIM2P55344 AC108032.1-201ENST00000416706 207 ntBASIC3.89□□□□□ -1.79
LIM2P55344 AL390879.2-203ENST00000426943 1121 ntBASIC3.89□□□□□ -1.79
LIM2P55344 RPL17P35-201ENST00000432217 549 ntBASIC3.89□□□□□ -1.79
LIM2P55344 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.89□□□□□ -1.79
LIM2P55344 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.89□□□□□ -1.79
LIM2P55344 XKRYP5-201ENST00000449659 483 ntBASIC3.89□□□□□ -1.79
LIM2P55344 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.89□□□□□ -1.79
LIM2P55344 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.89□□□□□ -1.79
LIM2P55344 RPL7P1-201ENST00000468161 747 ntBASIC3.89□□□□□ -1.79
LIM2P55344 RPL7P9-201ENST00000468715 747 ntBASIC3.89□□□□□ -1.79
LIM2P55344 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.89□□□□□ -1.79
LIM2P55344 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.89□□□□□ -1.79
LIM2P55344 HPRT1P2-201ENST00000505250 544 ntBASIC3.89□□□□□ -1.79
LIM2P55344 AC027338.1-201ENST00000514840 825 ntBASIC3.89□□□□□ -1.79
LIM2P55344 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.89□□□□□ -1.79
LIM2P55344 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.89□□□□□ -1.79
LIM2P55344 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.89□□□□□ -1.79
LIM2P55344 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.89□□□□□ -1.79
LIM2P55344 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.89□□□□□ -1.79
LIM2P55344 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.89□□□□□ -1.79
LIM2P55344 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.89□□□□□ -1.79
LIM2P55344 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.89□□□□□ -1.79
LIM2P55344 AC007599.1-201ENST00000568688 1174 ntBASIC3.89□□□□□ -1.79
LIM2P55344 MTND4LP25-201ENST00000570218 163 ntBASIC3.89□□□□□ -1.79
LIM2P55344 RPL23AP87-202ENST00000573039 466 ntBASIC3.89□□□□□ -1.79
LIM2P55344 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.89□□□□□ -1.79
LIM2P55344 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LIM2P55344 AL590392.1-201ENST00000604960 446 ntBASIC3.89□□□□□ -1.79
LIM2P55344 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.89□□□□□ -1.79
LIM2P55344 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIM2P55344 AC090246.1-201ENST00000616499 426 ntBASIC3.89□□□□□ -1.79
LIM2P55344 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIM2P55344 AC010608.2-201ENST00000624830 470 ntBASIC3.89□□□□□ -1.79
LIM2P55344 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIM2P55344 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.89□□□□□ -1.79
LIM2P55344 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIM2P55344 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LIM2P55344 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
LIM2P55344 MTND4P26-201ENST00000415971 1359 ntBASIC3.89□□□□□ -1.79
LIM2P55344 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.88□□□□□ -1.79
LIM2P55344 GTF2H2B-203ENST00000508065 1432 ntBASIC3.88□□□□□ -1.79
LIM2P55344 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIM2P55344 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LIM2P55344 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIM2P55344 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIM2P55344 OR11H4-201ENST00000315409 1082 ntBASIC3.88□□□□□ -1.79
LIM2P55344 RNA5SP513-201ENST00000364648 118 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms