Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL589765.3-201ENST00000446084 462 ntBASIC4.47□□□□□ -1.69
CDH12P55289 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.47□□□□□ -1.69
CDH12P55289 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH12P55289 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CDH12P55289 AC117394.1-201ENST00000477323 567 ntBASIC4.47□□□□□ -1.69
CDH12P55289 RN7SL97P-201ENST00000486780 299 ntBASIC4.47□□□□□ -1.69
CDH12P55289 AC005912.1-201ENST00000495392 255 ntBASIC4.47□□□□□ -1.69
CDH12P55289 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH12P55289 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH12P55289 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CDH12P55289 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.47□□□□□ -1.69
CDH12P55289 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDH12P55289 AP001317.1-201ENST00000531194 960 ntBASIC4.47□□□□□ -1.69
CDH12P55289 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH12P55289 AC092490.3-201ENST00000545370 572 ntBASIC4.47□□□□□ -1.69
CDH12P55289 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH12P55289 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH12P55289 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH12P55289 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH12P55289 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.47□□□□□ -1.69
CDH12P55289 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH12P55289 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH12P55289 AC135628.1-201ENST00000568867 534 ntBASIC4.47□□□□□ -1.69
CDH12P55289 MIR4489-201ENST00000578869 62 ntBASIC4.47□□□□□ -1.69
CDH12P55289 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH12P55289 MIR4691-201ENST00000583764 85 ntBASIC4.47□□□□□ -1.69
CDH12P55289 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH12P55289 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.47□□□□□ -1.69
CDH12P55289 AL031281.1-201ENST00000604049 488 ntBASIC4.47□□□□□ -1.69
CDH12P55289 AC121247.2-201ENST00000604776 136 ntBASIC4.47□□□□□ -1.69
CDH12P55289 AL158042.1-201ENST00000605338 460 ntBASIC4.47□□□□□ -1.69
CDH12P55289 AP004247.3-201ENST00000608682 624 ntBASIC4.47□□□□□ -1.69
CDH12P55289 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH12P55289 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH12P55289 AL139418.1-201ENST00000613613 177 ntBASIC4.47□□□□□ -1.69
CDH12P55289 MIR4278-201ENST00000636094 69 ntBASIC4.47□□□□□ -1.69
CDH12P55289 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDH12P55289 OR8B1P-202ENST00000641132 1178 ntBASIC4.47□□□□□ -1.69
CDH12P55289 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH12P55289 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH12P55289 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH12P55289 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH12P55289 AC046144.1-201ENST00000478559 1853 ntBASIC4.47□□□□□ -1.69
CDH12P55289 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CDH12P55289 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH12P55289 AC108751.5-201ENST00000492880 1336 ntBASIC4.46□□□□□ -1.69
CDH12P55289 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.46□□□□□ -1.69
CDH12P55289 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CDH12P55289 AC119744.1-201ENST00000454746 1715 ntBASIC4.46□□□□□ -1.69
CDH12P55289 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CDH12P55289 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CDH12P55289 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CDH12P55289 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CDH12P55289 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
CDH12P55289 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CDH12P55289 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CDH12P55289 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.46□□□□□ -1.69
CDH12P55289 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH12P55289 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH12P55289 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.46□□□□□ -1.7
CDH12P55289 SGO1P2-201ENST00000429458 1589 ntBASIC4.46□□□□□ -1.7
CDH12P55289 HMGB1P5-201ENST00000255320 642 ntBASIC4.46□□□□□ -1.7
CDH12P55289 RNU4-4P-201ENST00000364588 130 ntBASIC4.46□□□□□ -1.7
CDH12P55289 RNA5SP428-201ENST00000365129 132 ntBASIC4.46□□□□□ -1.7
CDH12P55289 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH12P55289 OR52E6-202ENST00000379946 954 ntBASIC4.46□□□□□ -1.7
CDH12P55289 Y_RNA.408-201ENST00000383987 102 ntBASIC4.46□□□□□ -1.7
CDH12P55289 MIR217-201ENST00000384817 110 ntBASIC4.46□□□□□ -1.7
CDH12P55289 VDAC2P1-201ENST00000399358 958 ntBASIC4.46□□□□□ -1.7
CDH12P55289 AL080315.1-201ENST00000406055 466 ntBASIC4.46□□□□□ -1.7
CDH12P55289 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH12P55289 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.46□□□□□ -1.7
CDH12P55289 RPL7P4-203ENST00000430239 730 ntBASIC4.46□□□□□ -1.7
CDH12P55289 USP9YP22-201ENST00000438971 294 ntBASIC4.46□□□□□ -1.7
CDH12P55289 MTND3P1-201ENST00000441336 220 ntBASIC4.46□□□□□ -1.7
CDH12P55289 RNU7-125P-201ENST00000458760 62 ntBASIC4.46□□□□□ -1.7
CDH12P55289 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.46□□□□□ -1.7
CDH12P55289 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.46□□□□□ -1.7
CDH12P55289 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH12P55289 BX284632.1-201ENST00000478218 541 ntBASIC4.46□□□□□ -1.7
CDH12P55289 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
CDH12P55289 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDH12P55289 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.46□□□□□ -1.7
CDH12P55289 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDH12P55289 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.46□□□□□ -1.7
CDH12P55289 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH12P55289 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDH12P55289 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.46□□□□□ -1.7
CDH12P55289 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDH12P55289 RNU6-347P-201ENST00000516658 105 ntBASIC4.46□□□□□ -1.7
CDH12P55289 RN7SKP283-201ENST00000517197 270 ntBASIC4.46□□□□□ -1.7
CDH12P55289 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH12P55289 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDH12P55289 AC022832.1-201ENST00000530718 645 ntBASIC4.46□□□□□ -1.7
CDH12P55289 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH12P55289 HIGD1AP17-201ENST00000554576 276 ntBASIC4.46□□□□□ -1.7
CDH12P55289 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.46□□□□□ -1.7
CDH12P55289 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.46□□□□□ -1.7
CDH12P55289 AP005136.1-201ENST00000579765 429 ntBASIC4.46□□□□□ -1.7
CDH12P55289 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms