Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH4P55283 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.2□□□□□ -1.74
CDH4P55283 HSPE1P12-201ENST00000412576 301 ntBASIC4.2□□□□□ -1.74
CDH4P55283 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH4P55283 AC115285.1-201ENST00000424879 736 ntBASIC4.2□□□□□ -1.74
CDH4P55283 RWDD4P2-201ENST00000426392 563 ntBASIC4.2□□□□□ -1.74
CDH4P55283 AL358472.1-201ENST00000431295 329 ntBASIC4.2□□□□□ -1.74
CDH4P55283 MTCO1P57-201ENST00000432182 261 ntBASIC4.2□□□□□ -1.74
CDH4P55283 RPS4XP4-201ENST00000443195 763 ntBASIC4.2□□□□□ -1.74
CDH4P55283 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH4P55283 NDUFS5P3-201ENST00000450668 321 ntBASIC4.2□□□□□ -1.74
CDH4P55283 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH4P55283 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH4P55283 AC010469.1-201ENST00000463864 576 ntBASIC4.2□□□□□ -1.74
CDH4P55283 RN7SL585P-201ENST00000470538 280 ntBASIC4.2□□□□□ -1.74
CDH4P55283 RWDD4P1-201ENST00000488019 565 ntBASIC4.2□□□□□ -1.74
CDH4P55283 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.2□□□□□ -1.74
CDH4P55283 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH4P55283 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.2□□□□□ -1.74
CDH4P55283 RNU7-143P-201ENST00000516781 65 ntBASIC4.2□□□□□ -1.74
CDH4P55283 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH4P55283 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.2□□□□□ -1.74
CDH4P55283 RPL23AP87-202ENST00000573039 466 ntBASIC4.2□□□□□ -1.74
CDH4P55283 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH4P55283 AC012417.1-201ENST00000582307 1039 ntBASIC4.2□□□□□ -1.74
CDH4P55283 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH4P55283 AC114878.2-201ENST00000604863 1251 ntBASIC4.2□□□□□ -1.74
CDH4P55283 AL096803.3-201ENST00000609032 532 ntBASIC4.2□□□□□ -1.74
CDH4P55283 AC090246.1-201ENST00000616499 426 ntBASIC4.2□□□□□ -1.74
CDH4P55283 LINC00216-201ENST00000623548 1126 ntBASIC4.2□□□□□ -1.74
CDH4P55283 AC008785.1-201ENST00000624475 456 ntBASIC4.2□□□□□ -1.74
CDH4P55283 AC015726.3-201ENST00000624501 418 ntBASIC4.2□□□□□ -1.74
CDH4P55283 RNA5SP196-201ENST00000625967 102 ntBASIC4.2□□□□□ -1.74
CDH4P55283 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CDH4P55283 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH4P55283 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH4P55283 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
CDH4P55283 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CDH4P55283 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH4P55283 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
CDH4P55283 RLIMP1-201ENST00000339626 1680 ntBASIC4.19□□□□□ -1.74
CDH4P55283 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH4P55283 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH4P55283 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH4P55283 AC093311.1-201ENST00000506586 2021 ntBASIC4.19□□□□□ -1.74
CDH4P55283 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH4P55283 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH4P55283 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH4P55283 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH4P55283 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH4P55283 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH4P55283 FABP12P1-201ENST00000401911 322 ntBASIC4.19□□□□□ -1.74
CDH4P55283 GSTM3P2-201ENST00000412746 530 ntBASIC4.19□□□□□ -1.74
CDH4P55283 PGBD4P8-201ENST00000412993 562 ntBASIC4.19□□□□□ -1.74
CDH4P55283 AL512504.1-201ENST00000415494 778 ntBASIC4.19□□□□□ -1.74
CDH4P55283 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH4P55283 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH4P55283 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH4P55283 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH4P55283 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH4P55283 HMGB3P21-201ENST00000452483 547 ntBASIC4.19□□□□□ -1.74
CDH4P55283 AC092691.2-201ENST00000461787 803 ntBASIC4.19□□□□□ -1.74
CDH4P55283 AC006517.1-201ENST00000480485 328 ntBASIC4.19□□□□□ -1.74
CDH4P55283 AL132838.2-201ENST00000492041 314 ntBASIC4.19□□□□□ -1.74
CDH4P55283 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH4P55283 AC017037.1-201ENST00000508460 471 ntBASIC4.19□□□□□ -1.74
CDH4P55283 KRT19P6-201ENST00000510983 209 ntBASIC4.19□□□□□ -1.74
CDH4P55283 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH4P55283 RNU6-1004P-201ENST00000516584 111 ntBASIC4.19□□□□□ -1.74
CDH4P55283 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH4P55283 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH4P55283 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH4P55283 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH4P55283 AC025627.2-201ENST00000576220 160 ntBASIC4.19□□□□□ -1.74
CDH4P55283 MIR3160-1-201ENST00000577972 85 ntBASIC4.19□□□□□ -1.74
CDH4P55283 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH4P55283 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH4P55283 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH4P55283 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH4P55283 OR6R2P-201ENST00000609216 300 ntBASIC4.19□□□□□ -1.74
CDH4P55283 AC243654.2-201ENST00000612843 443 ntBASIC4.19□□□□□ -1.74
CDH4P55283 AL669942.2-201ENST00000620352 697 ntBASIC4.19□□□□□ -1.74
CDH4P55283 AC000123.2-201ENST00000623124 461 ntBASIC4.19□□□□□ -1.74
CDH4P55283 CASC19-261ENST00000641853 1638 ntBASIC4.19□□□□□ -1.74
CDH4P55283 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.19□□□□□ -1.74
CDH4P55283 AC017002.4-201ENST00000604721 1525 ntBASIC4.19□□□□□ -1.74
CDH4P55283 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CDH4P55283 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH4P55283 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH4P55283 RPL21P65-201ENST00000406094 466 ntBASIC4.18□□□□□ -1.74
CDH4P55283 AC244453.4-201ENST00000419150 388 ntBASIC4.18□□□□□ -1.74
CDH4P55283 RFESDP1-201ENST00000422350 461 ntBASIC4.18□□□□□ -1.74
CDH4P55283 RPS6P12-201ENST00000432491 726 ntBASIC4.18□□□□□ -1.74
CDH4P55283 AC006326.1-201ENST00000445465 787 ntBASIC4.18□□□□□ -1.74
CDH4P55283 HMGB1P26-201ENST00000452520 628 ntBASIC4.18□□□□□ -1.74
CDH4P55283 RPL23AP2-201ENST00000471227 466 ntBASIC4.18□□□□□ -1.74
CDH4P55283 AC010683.1-201ENST00000473673 378 ntBASIC4.18□□□□□ -1.74
CDH4P55283 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH4P55283 RPS6P4-201ENST00000494693 758 ntBASIC4.18□□□□□ -1.74
CDH4P55283 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms