Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF4P48230 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF4P48230 HMGB1P16-201ENST00000447155 540 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 AC007327.1-201ENST00000447461 264 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TM4SF4P48230 RPL7L1P8-201ENST00000469911 741 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 PRDX3P4-201ENST00000470828 747 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 MTCO3P35-201ENST00000485582 781 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
TM4SF4P48230 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.39□□□□□ -1.55
TM4SF4P48230 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF4P48230 AC026407.1-201ENST00000518369 204 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF4P48230 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF4P48230 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.39□□□□□ -1.55
TM4SF4P48230 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF4P48230 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF4P48230 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF4P48230 AC092747.2-201ENST00000545069 983 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.39□□□□□ -1.55
TM4SF4P48230 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF4P48230 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.39□□□□□ -1.55
TM4SF4P48230 AC116553.2-201ENST00000564203 463 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 AC093249.4-201ENST00000564755 259 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF4P48230 MTND3P13-201ENST00000574391 343 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF4P48230 AL390816.3-201ENST00000604527 1066 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 AC016877.3-201ENST00000606778 504 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF4P48230 AP004247.3-201ENST00000608682 624 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.39□□□□□ -1.55
TM4SF4P48230 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.39□□□□□ -1.55
TM4SF4P48230 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
TM4SF4P48230 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF4P48230 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TM4SF4P48230 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF4P48230 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF4P48230 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF4P48230 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.38□□□□□ -1.55
TM4SF4P48230 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.38□□□□□ -1.55
TM4SF4P48230 ABCC13-202ENST00000463099 3842 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 AC108467.2-201ENST00000617640 1597 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF4P48230 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF4P48230 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF4P48230 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TM4SF4P48230 SPRR2C-201ENST00000290702 219 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF4P48230 MIR208A-201ENST00000362287 71 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 RNU4-92P-201ENST00000363783 136 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TM4SF4P48230 TAS2R15P-201ENST00000390674 928 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 PRELID3BP11-201ENST00000414230 479 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.38□□□□□ -1.55
TM4SF4P48230 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.38□□□□□ -1.55
TM4SF4P48230 RPL37P1-201ENST00000432310 284 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.38□□□□□ -1.55
TM4SF4P48230 AC092393.1-201ENST00000439625 742 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.38□□□□□ -1.55
TM4SF4P48230 Z73417.1-201ENST00000447373 778 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 RPL23AP15-201ENST00000450202 459 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 SCARNA10-201ENST00000459255 330 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 AC096992.1-201ENST00000459808 709 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 AC010683.1-201ENST00000473673 378 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF4P48230 RN7SL132P-201ENST00000478131 296 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF4P48230 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.38□□□□□ -1.55
TM4SF4P48230 PARP4P3-201ENST00000510265 317 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.38□□□□□ -1.55
TM4SF4P48230 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.38□□□□□ -1.55
TM4SF4P48230 HIGD1AP6-201ENST00000521833 279 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF4P48230 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.38□□□□□ -1.55
TM4SF4P48230 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.38□□□□□ -1.55
TM4SF4P48230 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.38□□□□□ -1.55
TM4SF4P48230 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.38□□□□□ -1.55
TM4SF4P48230 AC006363.1-201ENST00000603806 463 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 AP003973.1-201ENST00000604639 691 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.38□□□□□ -1.55
TM4SF4P48230 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.38□□□□□ -1.55
TM4SF4P48230 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF4P48230 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TM4SF4P48230 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF4P48230 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF4P48230 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
TM4SF4P48230 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF4P48230 Z99496.1-201ENST00000469424 1477 ntBASIC5.38□□□□□ -1.55
TM4SF4P48230 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF4P48230 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF4P48230 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TM4SF4P48230 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM4SF4P48230 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
TM4SF4P48230 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM4SF4P48230 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM4SF4P48230 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.37□□□□□ -1.55
TM4SF4P48230 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM4SF4P48230 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms