Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HADHAP40939 ANKRD36P1-201ENST00000344424 659 ntBASIC4.72□□□□□ -1.65
HADHAP40939 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.72□□□□□ -1.65
HADHAP40939 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HADHAP40939 MIR195-201ENST00000385194 87 ntBASIC4.72□□□□□ -1.65
HADHAP40939 RNU1-82P-201ENST00000390851 165 ntBASIC4.72□□□□□ -1.65
HADHAP40939 RNU6-298P-201ENST00000390888 96 ntBASIC4.72□□□□□ -1.65
HADHAP40939 MTCO2P31-201ENST00000402702 684 ntBASIC4.72□□□□□ -1.65
HADHAP40939 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.72□□□□□ -1.65
HADHAP40939 RN7SKP267-201ENST00000410381 285 ntBASIC4.72□□□□□ -1.65
HADHAP40939 RNU6-272P-201ENST00000411028 104 ntBASIC4.72□□□□□ -1.65
HADHAP40939 RN7SKP100-201ENST00000411258 284 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AL450992.3-201ENST00000413192 568 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.72□□□□□ -1.65
HADHAP40939 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
HADHAP40939 HMGB1P45-201ENST00000435986 653 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AC016831.4-201ENST00000438302 307 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.72□□□□□ -1.65
HADHAP40939 H2AFZP5-201ENST00000446960 382 ntBASIC4.72□□□□□ -1.65
HADHAP40939 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.72□□□□□ -1.65
HADHAP40939 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.72□□□□□ -1.65
HADHAP40939 RN7SL41P-201ENST00000476144 297 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AC104982.1-201ENST00000478775 574 ntBASIC4.72□□□□□ -1.65
HADHAP40939 RPS4XP18-201ENST00000495480 763 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.72□□□□□ -1.65
HADHAP40939 AC008837.1-201ENST00000511513 412 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AC092593.2-201ENST00000513866 913 ntBASIC4.72□□□□□ -1.65
HADHAP40939 RN7SKP276-201ENST00000516242 268 ntBASIC4.72□□□□□ -1.65
HADHAP40939 RNU6-1028P-201ENST00000517164 93 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.72□□□□□ -1.65
HADHAP40939 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.72□□□□□ -1.65
HADHAP40939 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.72□□□□□ -1.65
HADHAP40939 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.72□□□□□ -1.65
HADHAP40939 RN7SL52P-201ENST00000584271 284 ntBASIC4.72□□□□□ -1.65
HADHAP40939 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.72□□□□□ -1.65
HADHAP40939 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.72□□□□□ -1.65
HADHAP40939 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.72□□□□□ -1.65
HADHAP40939 AL606834.3-201ENST00000602615 496 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AC002487.1-201ENST00000604565 994 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AC115621.1-201ENST00000604653 858 ntBASIC4.72□□□□□ -1.65
HADHAP40939 OR6R2P-201ENST00000609216 300 ntBASIC4.72□□□□□ -1.65
HADHAP40939 MIR6864-201ENST00000617935 70 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HADHAP40939 AC005086.4-201ENST00000623065 213 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AC067852.7-201ENST00000623270 535 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.72□□□□□ -1.65
HADHAP40939 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.72□□□□□ -1.65
HADHAP40939 A2MP1-204ENST00000566278 4130 ntBASIC4.72□□□□□ -1.65
HADHAP40939 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
HADHAP40939 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HADHAP40939 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
HADHAP40939 OR14L1P-202ENST00000641545 3009 ntBASIC4.72□□□□□ -1.65
HADHAP40939 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.72□□□□□ -1.65
HADHAP40939 AC108751.5-201ENST00000492880 1336 ntBASIC4.72□□□□□ -1.65
HADHAP40939 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HADHAP40939 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.72□□□□□ -1.65
HADHAP40939 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.71□□□□□ -1.65
HADHAP40939 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.71□□□□□ -1.65
HADHAP40939 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HADHAP40939 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HADHAP40939 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HADHAP40939 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HADHAP40939 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.71□□□□□ -1.66
HADHAP40939 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HADHAP40939 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HADHAP40939 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HADHAP40939 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HADHAP40939 RNU5E-10P-201ENST00000363506 118 ntBASIC4.71□□□□□ -1.66
HADHAP40939 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
HADHAP40939 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HADHAP40939 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HADHAP40939 RNU6-1151P-201ENST00000384684 107 ntBASIC4.71□□□□□ -1.66
HADHAP40939 MIR16-1-201ENST00000385271 89 ntBASIC4.71□□□□□ -1.66
HADHAP40939 SNORD96B-201ENST00000386148 79 ntBASIC4.71□□□□□ -1.66
HADHAP40939 RNA5SP372-201ENST00000390836 115 ntBASIC4.71□□□□□ -1.66
HADHAP40939 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HADHAP40939 Y_RNA.625-201ENST00000411256 107 ntBASIC4.71□□□□□ -1.66
HADHAP40939 AC004022.2-201ENST00000413824 193 ntBASIC4.71□□□□□ -1.66
HADHAP40939 RPL21P108-201ENST00000413857 481 ntBASIC4.71□□□□□ -1.66
HADHAP40939 AL590139.1-201ENST00000416267 400 ntBASIC4.71□□□□□ -1.66
HADHAP40939 Z74021.1-201ENST00000423610 407 ntBASIC4.71□□□□□ -1.66
HADHAP40939 OR2B7P-201ENST00000429302 934 ntBASIC4.71□□□□□ -1.66
HADHAP40939 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.71□□□□□ -1.66
HADHAP40939 AC079168.2-201ENST00000453977 416 ntBASIC4.71□□□□□ -1.66
HADHAP40939 RPL6P9-201ENST00000466502 859 ntBASIC4.71□□□□□ -1.66
HADHAP40939 RN7SL817P-201ENST00000480777 288 ntBASIC4.71□□□□□ -1.66
HADHAP40939 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.71□□□□□ -1.66
HADHAP40939 HMGB1P21-201ENST00000502313 581 ntBASIC4.71□□□□□ -1.66
HADHAP40939 AC091860.1-201ENST00000505723 432 ntBASIC4.71□□□□□ -1.66
HADHAP40939 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.71□□□□□ -1.66
HADHAP40939 AC010374.2-201ENST00000512933 535 ntBASIC4.71□□□□□ -1.66
HADHAP40939 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.71□□□□□ -1.66
HADHAP40939 RNU6-416P-201ENST00000516265 103 ntBASIC4.71□□□□□ -1.66
HADHAP40939 AC134698.5-201ENST00000519444 336 ntBASIC4.71□□□□□ -1.66
HADHAP40939 OR8I1P-201ENST00000529291 931 ntBASIC4.71□□□□□ -1.66
HADHAP40939 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.71□□□□□ -1.66
HADHAP40939 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.71□□□□□ -1.66
HADHAP40939 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.71□□□□□ -1.66
HADHAP40939 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.71□□□□□ -1.66
HADHAP40939 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms