Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC12P31275 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXC12P31275 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXC12P31275 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXC12P31275 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXC12P31275 OR9K1P-202ENST00000641111 3217 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXC12P31275 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXC12P31275 AL121839.2-201ENST00000565058 6943 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXC12P31275 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
HOXC12P31275 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXC12P31275 TMSB4XP4-201ENST00000323496 618 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 Y_RNA.70-201ENST00000362886 110 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 U8.3-201ENST00000363321 132 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 Y_RNA.402-201ENST00000383972 102 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 ARF4P3-201ENST00000397387 509 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 HSPD1P16-201ENST00000402302 394 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 AL023807.1-201ENST00000407932 359 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 RNA5SP178-201ENST00000410380 128 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 RN7SKP121-201ENST00000410842 305 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 MTCO1P17-201ENST00000411522 491 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXC12P31275 AC009237.5-201ENST00000414271 501 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXC12P31275 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXC12P31275 AC073464.1-201ENST00000429823 534 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXC12P31275 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXC12P31275 PPIAP10-201ENST00000438675 458 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 MTCO3P18-201ENST00000440206 761 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 SNRPEP8-201ENST00000442866 260 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 CEACAMP9-201ENST00000442990 513 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 RPS4XP4-201ENST00000443195 763 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.48□□□□□ -1.53
HOXC12P31275 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.48□□□□□ -1.53
HOXC12P31275 FABP3P2-201ENST00000453169 399 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 SBDSP1-204ENST00000453858 737 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.48□□□□□ -1.53
HOXC12P31275 BX322784.1-201ENST00000455793 1077 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXC12P31275 RN7SL273P-201ENST00000481561 299 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.48□□□□□ -1.53
HOXC12P31275 KCTD9P5-201ENST00000504141 1170 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXC12P31275 AC090958.1-201ENST00000511122 351 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 SAP18P1-201ENST00000512058 390 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 AC010493.1-201ENST00000513479 292 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXC12P31275 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXC12P31275 SNORD46.2-201ENST00000516021 102 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 Y_RNA.702-201ENST00000516843 96 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 RNU2-46P-201ENST00000517038 113 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 IGKV2-19-201ENST00000518132 283 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXC12P31275 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXC12P31275 AP001893.2-201ENST00000526949 202 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 FAM92A1P1-201ENST00000528023 890 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXC12P31275 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXC12P31275 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.48□□□□□ -1.53
HOXC12P31275 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXC12P31275 MRPS21P8-201ENST00000569196 235 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXC12P31275 HMGN1P30-201ENST00000589286 268 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXC12P31275 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.48□□□□□ -1.53
HOXC12P31275 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXC12P31275 DUXAP4-201ENST00000603046 613 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 MLECP1-201ENST00000615893 709 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXC12P31275 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXC12P31275 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXC12P31275 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXC12P31275 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXC12P31275 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HOXC12P31275 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXC12P31275 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXC12P31275 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.48□□□□□ -1.53
HOXC12P31275 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HOXC12P31275 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC12P31275 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HOXC12P31275 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 RPL23AP57-201ENST00000332361 466 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HOXC12P31275 SNORD115.1-201ENST00000391109 76 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 AC016769.3-201ENST00000396562 315 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms