Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
VAMP1P23763 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 AL807761.1-201ENST00000417622 171 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AL139413.1-201ENST00000421309 217 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AC009480.2-201ENST00000422916 432 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP1P23763 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.61□□□□□ -1.51
VAMP1P23763 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP1P23763 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.61□□□□□ -1.51
VAMP1P23763 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
VAMP1P23763 AC128677.1-201ENST00000436016 442 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AC009237.4-201ENST00000441078 238 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP1P23763 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.61□□□□□ -1.51
VAMP1P23763 CYCSP44-201ENST00000448560 313 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.61□□□□□ -1.51
VAMP1P23763 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP1P23763 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP1P23763 AC005008.1-201ENST00000456151 612 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 RN7SL352P-201ENST00000466002 277 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 RN7SL688P-201ENST00000471754 275 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 RN7SL152P-201ENST00000484176 298 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 RPL32P9-201ENST00000487963 407 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 RPL7P23-201ENST00000493874 747 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 RPL10P7-201ENST00000495649 625 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 RN7SL516P-201ENST00000496127 297 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AC006070.1-201ENST00000508151 193 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AC114801.1-201ENST00000512633 297 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP1P23763 IGHV1-14-201ENST00000523391 241 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.61□□□□□ -1.51
VAMP1P23763 FAM60DP-201ENST00000524174 632 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP1P23763 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.61□□□□□ -1.51
VAMP1P23763 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP1P23763 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.61□□□□□ -1.51
VAMP1P23763 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.61□□□□□ -1.51
VAMP1P23763 HMGB1P6-201ENST00000569046 646 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AC090616.5-202ENST00000582111 297 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.61□□□□□ -1.51
VAMP1P23763 AC105224.1-201ENST00000587055 421 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 DHX40P1-201ENST00000588725 1412 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.61□□□□□ -1.51
VAMP1P23763 RPS28P1-201ENST00000604589 187 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AL034351.1-201ENST00000605288 668 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP1P23763 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AC131238.1-201ENST00000617135 328 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AP005212.3-201ENST00000619964 528 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 AC009033.1-201ENST00000624279 431 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC5.61□□□□□ -1.51
VAMP1P23763 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.61□□□□□ -1.51
VAMP1P23763 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.61□□□□□ -1.51
VAMP1P23763 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
VAMP1P23763 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP1P23763 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP1P23763 FOLH1B-202ENST00000529567 2145 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 AC074029.4-201ENST00000624796 1859 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP1P23763 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP1P23763 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP1P23763 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP1P23763 CDY18P-201ENST00000438294 1609 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
VAMP1P23763 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VAMP1P23763 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VAMP1P23763 Y_RNA.159-201ENST00000363674 87 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 RN7SKP76-201ENST00000364419 323 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 RNA5SP442-201ENST00000365050 107 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 RNU6-754P-201ENST00000391166 107 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 RPSAP42-201ENST00000403415 878 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 LSM5-202ENST00000409292 538 ntTSL 2 BASIC5.6□□□□□ -1.51
VAMP1P23763 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.6□□□□□ -1.51
VAMP1P23763 RPL21P24-201ENST00000413752 448 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC5.6□□□□□ -1.51
VAMP1P23763 Z93019.1-201ENST00000416450 973 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP1P23763 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.6□□□□□ -1.51
VAMP1P23763 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.6□□□□□ -1.51
VAMP1P23763 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.6□□□□□ -1.51
VAMP1P23763 VN1R34P-201ENST00000447387 883 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.6□□□□□ -1.51
VAMP1P23763 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.6□□□□□ -1.51
VAMP1P23763 RNU7-63P-201ENST00000459054 62 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 RN7SL187P-201ENST00000495587 303 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 RN7SL775P-201ENST00000498361 336 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 NACAP5-201ENST00000509863 636 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.6□□□□□ -1.51
VAMP1P23763 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.6□□□□□ -1.51
VAMP1P23763 SCARNA24.1-201ENST00000516465 137 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 RNU6-64P-201ENST00000517119 105 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 AC090572.1-201ENST00000519251 160 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms