Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
TOP2AP11388 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
TOP2AP11388 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TOP2AP11388 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TOP2AP11388 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.33□□□□□ -1.4
TOP2AP11388 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.33□□□□□ -1.4
TOP2AP11388 NDUFB1P1-201ENST00000435191 180 ntBASIC6.33□□□□□ -1.4
TOP2AP11388 AC010655.1-201ENST00000449336 292 ntBASIC6.33□□□□□ -1.4
TOP2AP11388 RPL21P10-201ENST00000463521 490 ntBASIC6.33□□□□□ -1.4
TOP2AP11388 RN7SL807P-201ENST00000470923 297 ntBASIC6.33□□□□□ -1.4
TOP2AP11388 PHBP14-201ENST00000512887 367 ntBASIC6.33□□□□□ -1.4
TOP2AP11388 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TOP2AP11388 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TOP2AP11388 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.33□□□□□ -1.4
TOP2AP11388 AC009303.3-201ENST00000591103 736 ntBASIC6.33□□□□□ -1.4
TOP2AP11388 AC012603.1-201ENST00000606424 528 ntBASIC6.33□□□□□ -1.4
TOP2AP11388 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TOP2AP11388 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.33□□□□□ -1.4
TOP2AP11388 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TOP2AP11388 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TOP2AP11388 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TOP2AP11388 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
TOP2AP11388 AC011266.1-201ENST00000624119 3569 ntBASIC6.32□□□□□ -1.4
TOP2AP11388 AC007685.1-201ENST00000329806 452 ntBASIC6.32□□□□□ -1.4
TOP2AP11388 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
TOP2AP11388 BMS1P3-201ENST00000372011 932 ntBASIC6.32□□□□□ -1.4
TOP2AP11388 HIGD1AP12-201ENST00000427832 281 ntBASIC6.32□□□□□ -1.4
TOP2AP11388 AL035458.1-201ENST00000433096 585 ntBASIC6.32□□□□□ -1.4
TOP2AP11388 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.32□□□□□ -1.4
TOP2AP11388 ARL4AP1-201ENST00000503220 705 ntBASIC6.32□□□□□ -1.4
TOP2AP11388 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.32□□□□□ -1.4
TOP2AP11388 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TOP2AP11388 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TOP2AP11388 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TOP2AP11388 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TOP2AP11388 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TOP2AP11388 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
TOP2AP11388 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TOP2AP11388 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.32□□□□□ -1.4
TOP2AP11388 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TOP2AP11388 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TOP2AP11388 AC090337.1-201ENST00000579651 2074 ntBASIC6.31□□□□□ -1.4
TOP2AP11388 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TOP2AP11388 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
TOP2AP11388 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TOP2AP11388 HLFP1-201ENST00000402375 499 ntBASIC6.31□□□□□ -1.4
TOP2AP11388 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC6.31□□□□□ -1.4
TOP2AP11388 AC096638.2-201ENST00000434965 711 ntBASIC6.31□□□□□ -1.4
TOP2AP11388 ELOCP8-201ENST00000439309 332 ntBASIC6.31□□□□□ -1.4
TOP2AP11388 ELOCP15-201ENST00000442090 332 ntBASIC6.31□□□□□ -1.4
TOP2AP11388 RN7SL809P-201ENST00000482040 297 ntBASIC6.31□□□□□ -1.4
TOP2AP11388 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.31□□□□□ -1.4
TOP2AP11388 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.31□□□□□ -1.4
TOP2AP11388 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.31□□□□□ -1.4
TOP2AP11388 AL354976.1-201ENST00000613843 387 ntBASIC6.31□□□□□ -1.4
TOP2AP11388 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
TOP2AP11388 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC6.31□□□□□ -1.4
TOP2AP11388 AL133383.2-201ENST00000622958 2336 ntBASIC6.3□□□□□ -1.4
TOP2AP11388 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.3□□□□□ -1.4
TOP2AP11388 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.3□□□□□ -1.4
TOP2AP11388 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.3□□□□□ -1.4
TOP2AP11388 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.3□□□□□ -1.4
TOP2AP11388 AC109458.1-201ENST00000508858 316 ntBASIC6.3□□□□□ -1.4
TOP2AP11388 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.3□□□□□ -1.4
TOP2AP11388 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.3□□□□□ -1.4
TOP2AP11388 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TOP2AP11388 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
TOP2AP11388 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC6.3□□□□□ -1.4
TOP2AP11388 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
TOP2AP11388 CPD-202ENST00000543464 4007 ntTSL 2 BASIC6.3□□□□□ -1.4
TOP2AP11388 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TOP2AP11388 SNORA48.2-201ENST00000390926 124 ntBASIC6.3□□□□□ -1.4
TOP2AP11388 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.3□□□□□ -1.4
TOP2AP11388 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.3□□□□□ -1.4
TOP2AP11388 RSL24D1P3-201ENST00000449255 495 ntBASIC6.3□□□□□ -1.4
TOP2AP11388 AC098824.1-201ENST00000453565 980 ntBASIC6.3□□□□□ -1.4
TOP2AP11388 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.3□□□□□ -1.4
TOP2AP11388 TRBV12-2-201ENST00000489763 344 ntBASIC6.3□□□□□ -1.4
TOP2AP11388 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TOP2AP11388 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.3□□□□□ -1.4
TOP2AP11388 AC005476.1-201ENST00000554427 397 ntBASIC6.3□□□□□ -1.4
TOP2AP11388 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TOP2AP11388 LINC01109-201ENST00000603837 3081 ntBASIC6.3□□□□□ -1.4
TOP2AP11388 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.29□□□□□ -1.4
TOP2AP11388 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
TOP2AP11388 SMG1P4-204ENST00000523028 4131 ntBASIC6.29□□□□□ -1.4
TOP2AP11388 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOP2AP11388 AC009229.4-201ENST00000623854 1947 ntBASIC6.29□□□□□ -1.4
TOP2AP11388 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TOP2AP11388 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOP2AP11388 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.29□□□□□ -1.4
TOP2AP11388 HIST1H2APS3-201ENST00000403259 134 ntBASIC6.29□□□□□ -1.4
TOP2AP11388 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.29□□□□□ -1.4
TOP2AP11388 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.29□□□□□ -1.4
TOP2AP11388 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.29□□□□□ -1.4
TOP2AP11388 SUMO2P20-201ENST00000520803 283 ntBASIC6.29□□□□□ -1.4
TOP2AP11388 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.29□□□□□ -1.4
TOP2AP11388 AC027281.1-201ENST00000574178 758 ntBASIC6.29□□□□□ -1.4
TOP2AP11388 MIR5004-201ENST00000579078 107 ntBASIC6.29□□□□□ -1.4
TOP2AP11388 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms