Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC010683.1-201ENST00000473673 378 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AC022795.1-201ENST00000473808 480 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 NIP7P2-201ENST00000485801 544 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AC008494.2-201ENST00000514544 370 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 RN7SKP122-201ENST00000515923 296 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AL442163.2-201ENST00000553912 710 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 Z82195.1-201ENST00000604558 398 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AC015804.1-201ENST00000622935 435 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AL136164.3-201ENST00000624429 3978 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AC009951.1-201ENST00000623674 2614 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AC021146.4-201ENST00000309229 279 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 RNU6-353P-201ENST00000364266 108 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 MCTS2P-201ENST00000394552 546 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 GAPDHP49-201ENST00000421421 961 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 RGS17P1-201ENST00000423358 553 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 MTND1P33-201ENST00000446251 917 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AC091959.2-201ENST00000477363 321 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AC073522.1-201ENST00000483312 377 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 IGJP1-201ENST00000522682 475 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 MTCO1P40-201ENST00000574371 625 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 MIR4716-201ENST00000579628 84 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AL606834.3-201ENST00000602615 496 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AC023762.1-201ENST00000603280 584 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 IMMP1LP1-201ENST00000605170 488 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AL121652.1-201ENST00000608851 448 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AC012409.3-201ENST00000611343 981 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AC084824.4-201ENST00000620106 731 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AC010608.3-201ENST00000625048 527 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AL596275.2-204ENST00000641628 552 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AL596275.2-206ENST00000641957 626 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 BX649567.1-201ENST00000642071 1134 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 CYP1D1P-201ENST00000416662 1433 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 ASNSP1-204ENST00000641977 1664 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 AL031119.1-201ENST00000404707 1879 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 CASC19-204ENST00000641001 2055 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.34□□□□□ -1.71
RAB40ALP0C0E4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
RAB40ALP0C0E4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
RAB40ALP0C0E4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RAB40ALP0C0E4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 AC008549.2-201ENST00000333482 706 ntBASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 RNA5SP509-201ENST00000364577 119 ntBASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 RNU6-549P-201ENST00000384433 107 ntBASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 ARL4AP5-201ENST00000404372 599 ntBASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 CEACAMP8-201ENST00000413902 580 ntBASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 RPS26P40-201ENST00000435209 294 ntBASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.33□□□□□ -1.72
RAB40ALP0C0E4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms