Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 GTF3AP5-201ENST00000442645 697 ntBASIC4.91□□□□□ -1.62
MMP3P08254 USP9YP17-201ENST00000444617 696 ntBASIC4.91□□□□□ -1.62
MMP3P08254 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
MMP3P08254 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
MMP3P08254 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.91□□□□□ -1.62
MMP3P08254 RPS7P7-201ENST00000463499 571 ntBASIC4.91□□□□□ -1.62
MMP3P08254 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.91□□□□□ -1.62
MMP3P08254 RPL21P129-201ENST00000491732 478 ntBASIC4.91□□□□□ -1.62
MMP3P08254 AC026414.1-201ENST00000504046 698 ntBASIC4.91□□□□□ -1.62
MMP3P08254 AC008958.1-201ENST00000511047 682 ntBASIC4.91□□□□□ -1.62
MMP3P08254 RNU6-1028P-201ENST00000517164 93 ntBASIC4.91□□□□□ -1.62
MMP3P08254 OR5AK3P-201ENST00000527486 1297 ntBASIC4.91□□□□□ -1.62
MMP3P08254 DUXAP5-201ENST00000529668 529 ntBASIC4.91□□□□□ -1.62
MMP3P08254 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.91□□□□□ -1.62
MMP3P08254 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.91□□□□□ -1.62
MMP3P08254 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.91□□□□□ -1.62
MMP3P08254 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.91□□□□□ -1.62
MMP3P08254 AC093227.2-201ENST00000589357 285 ntBASIC4.91□□□□□ -1.62
MMP3P08254 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.91□□□□□ -1.62
MMP3P08254 GAS5-AS1-201ENST00000602767 694 ntBASIC4.91□□□□□ -1.62
MMP3P08254 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.91□□□□□ -1.62
MMP3P08254 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
MMP3P08254 AP002791.1-201ENST00000623291 381 ntBASIC4.91□□□□□ -1.62
MMP3P08254 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
MMP3P08254 ASNSP1-204ENST00000641977 1664 ntBASIC4.91□□□□□ -1.62
MMP3P08254 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
MMP3P08254 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.91□□□□□ -1.62
MMP3P08254 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
MMP3P08254 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
MMP3P08254 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
MMP3P08254 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.91□□□□□ -1.62
MMP3P08254 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
MMP3P08254 AC104118.1-201ENST00000607625 1589 ntBASIC4.91□□□□□ -1.62
MMP3P08254 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
MMP3P08254 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
MMP3P08254 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.9□□□□□ -1.62
MMP3P08254 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
MMP3P08254 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
MMP3P08254 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
MMP3P08254 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
MMP3P08254 RNU1-94P-201ENST00000362627 173 ntBASIC4.9□□□□□ -1.63
MMP3P08254 RN7SKP74-201ENST00000362849 309 ntBASIC4.9□□□□□ -1.63
MMP3P08254 RNU1-85P-201ENST00000364127 164 ntBASIC4.9□□□□□ -1.63
MMP3P08254 RNU6-729P-201ENST00000384399 107 ntBASIC4.9□□□□□ -1.63
MMP3P08254 RNU6-1242P-201ENST00000391052 103 ntBASIC4.9□□□□□ -1.63
MMP3P08254 RNU6-932P-201ENST00000391108 106 ntBASIC4.9□□□□□ -1.63
MMP3P08254 RPS27AP11-201ENST00000402798 447 ntBASIC4.9□□□□□ -1.63
MMP3P08254 RNU4-22P-201ENST00000411058 166 ntBASIC4.9□□□□□ -1.63
MMP3P08254 OR6C64P-201ENST00000419708 825 ntBASIC4.9□□□□□ -1.63
MMP3P08254 MTND2P16-201ENST00000419987 799 ntBASIC4.9□□□□□ -1.63
MMP3P08254 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.9□□□□□ -1.63
MMP3P08254 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.9□□□□□ -1.63
MMP3P08254 UBE2V1P3-201ENST00000439651 417 ntBASIC4.9□□□□□ -1.63
MMP3P08254 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.9□□□□□ -1.63
MMP3P08254 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.9□□□□□ -1.63
MMP3P08254 OR51B8P-201ENST00000449892 769 ntBASIC4.9□□□□□ -1.63
MMP3P08254 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.9□□□□□ -1.63
MMP3P08254 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MMP3P08254 AC134050.1-201ENST00000495088 933 ntBASIC4.9□□□□□ -1.63
MMP3P08254 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.9□□□□□ -1.63
MMP3P08254 HMGB3P16-201ENST00000508037 287 ntBASIC4.9□□□□□ -1.63
MMP3P08254 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.9□□□□□ -1.63
MMP3P08254 RFPL4AP5-201ENST00000514977 504 ntBASIC4.9□□□□□ -1.63
MMP3P08254 OR8I1P-201ENST00000529291 931 ntBASIC4.9□□□□□ -1.63
MMP3P08254 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.9□□□□□ -1.63
MMP3P08254 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.9□□□□□ -1.63
MMP3P08254 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.9□□□□□ -1.63
MMP3P08254 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.9□□□□□ -1.63
MMP3P08254 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MMP3P08254 DPRXP4-201ENST00000578053 568 ntBASIC4.9□□□□□ -1.63
MMP3P08254 AC091178.1-203ENST00000584586 279 ntBASIC4.9□□□□□ -1.63
MMP3P08254 BNIP3P22-201ENST00000593399 556 ntBASIC4.9□□□□□ -1.63
MMP3P08254 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.9□□□□□ -1.63
MMP3P08254 AC096586.1-201ENST00000610267 561 ntBASIC4.9□□□□□ -1.63
MMP3P08254 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.9□□□□□ -1.63
MMP3P08254 MIR8059-201ENST00000620427 81 ntBASIC4.9□□□□□ -1.63
MMP3P08254 AC011330.2-201ENST00000621680 635 ntBASIC4.9□□□□□ -1.63
MMP3P08254 AC120349.3-201ENST00000624377 529 ntBASIC4.9□□□□□ -1.63
MMP3P08254 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MMP3P08254 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
MMP3P08254 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
MMP3P08254 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MMP3P08254 IQCB2P-201ENST00000401788 1633 ntBASIC4.9□□□□□ -1.63
MMP3P08254 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MMP3P08254 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
MMP3P08254 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.89□□□□□ -1.63
MMP3P08254 NXPH1-205ENST00000602349 1953 ntBASIC4.89□□□□□ -1.63
MMP3P08254 AC100871.1-201ENST00000507871 1456 ntBASIC4.89□□□□□ -1.63
MMP3P08254 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
MMP3P08254 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
MMP3P08254 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
MMP3P08254 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
MMP3P08254 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
MMP3P08254 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
MMP3P08254 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.89□□□□□ -1.63
MMP3P08254 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
MMP3P08254 SPRR2C-201ENST00000290702 219 ntBASIC4.89□□□□□ -1.63
MMP3P08254 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
MMP3P08254 MIR513B-201ENST00000385136 84 ntBASIC4.89□□□□□ -1.63
MMP3P08254 MIR23A-201ENST00000385245 73 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms