Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQB2P05538 AP005901.4-201ENST00000577336 569 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DQB2P05538 AC099669.2-201ENST00000616549 437 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 AC020978.9-201ENST00000624380 1141 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 BMS1P21-201ENST00000634565 365 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQB2P05538 LINC00561-201ENST00000565815 2738 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQB2P05538 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQB2P05538 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC017007.4-201ENST00000503353 1352 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 RPL7P60-201ENST00000397636 735 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 RPL21P109-201ENST00000422213 475 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 RAB9AP5-201ENST00000437794 597 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 ELOCP3-201ENST00000439303 348 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 RAB9AP2-201ENST00000443911 597 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC006480.1-201ENST00000449887 378 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 MORF4L1P4-201ENST00000450245 976 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC133473.1-201ENST00000455173 299 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 CCDC75P1-201ENST00000469247 791 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC146944.2-203ENST00000502493 354 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC111000.5-201ENST00000506559 1178 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC139495.1-202ENST00000513164 354 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC026402.1-201ENST00000513642 170 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 RN7SKP209-201ENST00000516888 304 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 OR7E13P-201ENST00000526052 910 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC092747.2-201ENST00000545069 983 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AL133457.1-201ENST00000564251 987 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC107982.3-201ENST00000584957 985 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC096586.2-201ENST00000610260 441 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 AC009229.4-201ENST00000623854 1947 ntBASIC3.79□□□□□ -1.8
HLA-DQB2P05538 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQB2P05538 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 HSPA8P17-201ENST00000427029 1382 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 RNU1-18P-201ENST00000363062 164 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 FABP12P1-201ENST00000401911 322 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 TCEA1P2-201ENST00000420496 906 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 HMGB3P10-201ENST00000434734 572 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 NDUFB1P1-201ENST00000435191 180 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 MTND4LP12-201ENST00000448237 295 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 NANOGP10-201ENST00000453325 895 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 APOOP2-201ENST00000461561 539 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 AL133162.1-201ENST00000463228 453 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 RN7SL132P-201ENST00000478131 296 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 RN7SL809P-201ENST00000482040 297 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 AC006960.3-201ENST00000561845 705 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 AL359715.5-201ENST00000623431 443 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 AL356121.2-201ENST00000624715 780 ntBASIC3.78□□□□□ -1.8
HLA-DQB2P05538 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQB2P05538 AC006504.1-201ENST00000562493 3666 ntBASIC3.77□□□□□ -1.81
HLA-DQB2P05538 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQB2P05538 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HLA-DQB2P05538 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQB2P05538 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQB2P05538 AC026951.1-201ENST00000559530 2459 ntBASIC3.77□□□□□ -1.81
HLA-DQB2P05538 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQB2P05538 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms