Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC005261.4-201ENST00000600047 1385 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 SNORA27.3-201ENST00000364937 134 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 MIR320B1-201ENST00000390209 79 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 ATP5F1P4-201ENST00000397288 746 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 RN7SKP182-201ENST00000410772 298 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AL590609.2-201ENST00000421430 368 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AL450326.2-201ENST00000421913 1962 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC099336.2-201ENST00000422457 254 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 NUTF2P3-201ENST00000448540 384 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 RPS4XP5-202ENST00000449995 1334 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 MTCO3P16-201ENST00000454456 754 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC099560.2-201ENST00000457554 255 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC090543.1-201ENST00000492168 485 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 SNORA31.9-201ENST00000516429 84 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC105233.3-201ENST00000531125 744 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 CYCSP29-201ENST00000533731 318 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC092747.2-201ENST00000545069 983 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC023158.1-201ENST00000561632 1025 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC022655.2-201ENST00000577280 318 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC110741.2-201ENST00000605278 268 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC005962.2-201ENST00000611427 652 ntBASIC3.57□□□□□ -1.84
HLA-DPB1P04440 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DPB1P04440 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 LARP1BP1-201ENST00000506036 1359 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 OR5T3-201ENST00000303059 1023 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 YY1P1-201ENST00000427625 668 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 C4BPAP2-201ENST00000428434 478 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AC093824.1-201ENST00000508796 343 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AC093770.1-201ENST00000511559 571 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 RNU6-889P-201ENST00000517189 103 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AC069366.1-201ENST00000583159 838 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AL133247.2-201ENST00000603236 482 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AC114878.2-201ENST00000604863 1251 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AL445567.2-201ENST00000618935 498 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AC015908.5-201ENST00000623289 343 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 MIR6830-201ENST00000636015 70 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AC006504.1-201ENST00000562493 3666 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AP001486.2-201ENST00000561652 5113 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 AC009313.2-201ENST00000417893 1941 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 HSPA8P1-201ENST00000425843 1833 ntBASIC3.56□□□□□ -1.84
HLA-DPB1P04440 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DPB1P04440 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms