Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SNORA32.2-201ENST00000384049 122 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 MIR1-2-201ENST00000384961 85 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 AL591416.1-201ENST00000404015 867 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 MTND3P8-201ENST00000412909 339 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 AL035422.1-201ENST00000414193 397 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 MTCO3P12-201ENST00000416718 547 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 AL353729.1-201ENST00000425044 720 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 AC009965.2-201ENST00000425328 970 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PDGFAP04085 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFAP04085 FHP1-201ENST00000442741 703 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 AL450996.1-201ENST00000445574 1202 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 DDX3P2-201ENST00000446138 111 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 AL356010.1-201ENST00000456364 102 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 AC078785.3-201ENST00000476607 425 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFAP04085 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFAP04085 RNU6-1045P-201ENST00000516321 107 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 RNA5SP337-201ENST00000517007 109 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.14□□□□□ -1.43
PDGFAP04085 AP003497.1-201ENST00000528472 562 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFAP04085 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.14□□□□□ -1.43
PDGFAP04085 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC6.14□□□□□ -1.43
PDGFAP04085 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFAP04085 AC002310.3-201ENST00000569728 723 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 MIR3146-201ENST00000580367 79 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFAP04085 MIR4420-201ENST00000583944 77 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.14□□□□□ -1.43
PDGFAP04085 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.14□□□□□ -1.43
PDGFAP04085 AC010591.1-201ENST00000603941 649 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 AC004853.1-201ENST00000604902 698 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 AL031658.2-201ENST00000616850 651 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 AC090617.10-201ENST00000624308 134 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.14□□□□□ -1.43
PDGFAP04085 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFAP04085 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFAP04085 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.14□□□□□ -1.43
PDGFAP04085 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFAP04085 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFAP04085 MTND5P33-201ENST00000571250 1450 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PDGFAP04085 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.14□□□□□ -1.43
PDGFAP04085 OR4G1P-203ENST00000641984 1631 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFAP04085 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
PDGFAP04085 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.13□□□□□ -1.43
PDGFAP04085 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.13□□□□□ -1.43
PDGFAP04085 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
PDGFAP04085 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFAP04085 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.13□□□□□ -1.43
PDGFAP04085 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 RNA5SP333-201ENST00000363466 118 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 RNA5SP334-201ENST00000364825 118 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 AL356967.1-201ENST00000406305 431 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 RAB28P1-201ENST00000411517 641 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFAP04085 RPL31P45-201ENST00000419532 356 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFAP04085 MTND2P23-201ENST00000422990 651 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 AC234779.1-201ENST00000425910 285 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 COX6CP15-201ENST00000426313 211 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 SRIP2-201ENST00000428470 166 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 RPS29P14-201ENST00000431518 171 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 AC003989.1-201ENST00000434569 565 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 AL590399.4-201ENST00000436561 601 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 AC114495.1-201ENST00000441274 436 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PDGFAP04085 CACYBPP2-201ENST00000453625 678 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.13□□□□□ -1.43
PDGFAP04085 EIF4EP3-201ENST00000498782 656 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFAP04085 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 BTF3P12-201ENST00000519620 469 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 AC107953.1-201ENST00000522216 297 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFAP04085 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFAP04085 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFAP04085 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFAP04085 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFAP04085 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFAP04085 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFAP04085 AC023827.2-201ENST00000566880 1061 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 MIR4504-201ENST00000577413 92 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.13□□□□□ -1.43
PDGFAP04085 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFAP04085 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.13□□□□□ -1.43
PDGFAP04085 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.13□□□□□ -1.43
PDGFAP04085 AC068790.3-201ENST00000602988 553 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms