Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC012020.1-201ENST00000624541 1728 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 AL592437.2-201ENST00000421655 2434 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CHRNA1P02708 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CHRNA1P02708 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
CHRNA1P02708 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CHRNA1P02708 RNU6-213P-201ENST00000384051 104 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHRNA1P02708 RN7SKP222-201ENST00000410651 315 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.5□□□□□ -1.69
CHRNA1P02708 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHRNA1P02708 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHRNA1P02708 AL691449.1-201ENST00000426570 421 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 AL451062.2-201ENST00000427515 271 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.5□□□□□ -1.69
CHRNA1P02708 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.5□□□□□ -1.69
CHRNA1P02708 AC114878.1-201ENST00000441166 358 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHRNA1P02708 VN1R34P-201ENST00000447387 883 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 AL500522.2-201ENST00000448562 343 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.5□□□□□ -1.69
CHRNA1P02708 PSMC1P13-201ENST00000458195 985 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 PRELID3BP7-201ENST00000503606 469 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 AC108145.1-201ENST00000503770 153 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 KRT19P6-201ENST00000510983 209 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.5□□□□□ -1.69
CHRNA1P02708 PHBP17-201ENST00000528576 541 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.5□□□□□ -1.69
CHRNA1P02708 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.5□□□□□ -1.69
CHRNA1P02708 AC110743.1-201ENST00000584870 478 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHRNA1P02708 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.5□□□□□ -1.69
CHRNA1P02708 AC135803.1-201ENST00000608748 565 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 AC090912.3-201ENST00000609775 533 ntBASIC4.5□□□□□ -1.69
CHRNA1P02708 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.5□□□□□ -1.69
CHRNA1P02708 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.5□□□□□ -1.69
CHRNA1P02708 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.5□□□□□ -1.69
CHRNA1P02708 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CHRNA1P02708 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
CHRNA1P02708 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.5□□□□□ -1.69
CHRNA1P02708 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.49□□□□□ -1.69
CHRNA1P02708 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.49□□□□□ -1.69
CHRNA1P02708 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHRNA1P02708 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHRNA1P02708 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHRNA1P02708 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHRNA1P02708 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CHRNA1P02708 RNU6ATAC-201ENST00000408749 126 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.49□□□□□ -1.69
CHRNA1P02708 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 UBTFL3-201ENST00000418934 1024 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.49□□□□□ -1.69
CHRNA1P02708 GOT2P5-201ENST00000433995 546 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 AC245517.2-201ENST00000442890 346 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 RPS4XP4-201ENST00000443195 763 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.49□□□□□ -1.69
CHRNA1P02708 AL358232.1-201ENST00000448030 501 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 FGF7P3-201ENST00000454645 303 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 UBTFL6-201ENST00000477929 1024 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 AC110792.1-201ENST00000491826 472 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.49□□□□□ -1.69
CHRNA1P02708 SMARCE1P4-201ENST00000523647 241 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.49□□□□□ -1.69
CHRNA1P02708 MIR6868-201ENST00000611215 58 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHRNA1P02708 AC074276.2-201ENST00000619891 348 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 AL354798.1-201ENST00000622505 329 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 AC104820.1-201ENST00000624183 307 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 AC012442.3-202ENST00000636742 206 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHRNA1P02708 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHRNA1P02708 PNPT1P2-201ENST00000456768 2050 ntBASIC4.49□□□□□ -1.69
CHRNA1P02708 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA1P02708 AC018529.3-201ENST00000624212 2254 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRNA1P02708 AC134882.1-201ENST00000603738 1676 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRNA1P02708 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CHRNA1P02708 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRNA1P02708 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CHRNA1P02708 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA1P02708 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA1P02708 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA1P02708 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA1P02708 SNORA71.3-201ENST00000362582 128 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 RNU6-532P-201ENST00000384318 107 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CHRNA1P02708 PDSS1P1-201ENST00000422953 1114 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 OR5BE1P-201ENST00000425977 939 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA1P02708 AC018644.1-201ENST00000429934 551 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 AL358472.1-201ENST00000431295 329 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 NDUFA5P10-201ENST00000432147 357 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRNA1P02708 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRNA1P02708 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRNA1P02708 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRNA1P02708 AC007688.1-201ENST00000475592 759 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms