Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 AC233309.1-201ENST00000619522 751 ntBASIC3.81□□□□□ -1.8
CTNSO60931 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTNSO60931 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTNSO60931 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
CTNSO60931 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNSO60931 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTNSO60931 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTNSO60931 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTNSO60931 CASC19-261ENST00000641853 1638 ntBASIC3.81□□□□□ -1.8
CTNSO60931 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CTNSO60931 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CTNSO60931 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNSO60931 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTNSO60931 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTNSO60931 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTNSO60931 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTNSO60931 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.8□□□□□ -1.8
CTNSO60931 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.8□□□□□ -1.8
CTNSO60931 RPL7P53-201ENST00000421245 739 ntBASIC3.8□□□□□ -1.8
CTNSO60931 OR5BE1P-201ENST00000425977 939 ntBASIC3.8□□□□□ -1.8
CTNSO60931 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.8□□□□□ -1.8
CTNSO60931 MTCO1P45-201ENST00000431457 267 ntBASIC3.8□□□□□ -1.8
CTNSO60931 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.8□□□□□ -1.8
CTNSO60931 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.8□□□□□ -1.8
CTNSO60931 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNSO60931 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.8□□□□□ -1.8
CTNSO60931 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNSO60931 IGKV2-38-201ENST00000517443 247 ntBASIC3.8□□□□□ -1.8
CTNSO60931 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.8□□□□□ -1.8
CTNSO60931 AC007224.1-201ENST00000564410 144 ntBASIC3.8□□□□□ -1.8
CTNSO60931 AC110743.1-201ENST00000584870 478 ntBASIC3.8□□□□□ -1.8
CTNSO60931 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.8□□□□□ -1.8
CTNSO60931 MTCO2P22-201ENST00000603246 681 ntBASIC3.8□□□□□ -1.8
CTNSO60931 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.8□□□□□ -1.8
CTNSO60931 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNSO60931 AC016717.3-201ENST00000624730 554 ntBASIC3.8□□□□□ -1.8
CTNSO60931 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNSO60931 OR5BE1P-202ENST00000641168 1176 ntBASIC3.8□□□□□ -1.8
CTNSO60931 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTNSO60931 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTNSO60931 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CTNSO60931 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTNSO60931 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CTNSO60931 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNSO60931 RLIMP1-201ENST00000339626 1680 ntBASIC3.8□□□□□ -1.8
CTNSO60931 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTNSO60931 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNSO60931 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNSO60931 AC106871.1-201ENST00000568324 3102 ntBASIC3.79□□□□□ -1.8
CTNSO60931 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.79□□□□□ -1.8
CTNSO60931 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.79□□□□□ -1.8
CTNSO60931 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CTNSO60931 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CTNSO60931 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTNSO60931 RNU1-13P-201ENST00000384499 162 ntBASIC3.79□□□□□ -1.8
CTNSO60931 HMGB3P19-201ENST00000403971 560 ntBASIC3.79□□□□□ -1.8
CTNSO60931 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.79□□□□□ -1.8
CTNSO60931 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.79□□□□□ -1.8
CTNSO60931 AC004975.1-201ENST00000428733 208 ntBASIC3.79□□□□□ -1.8
CTNSO60931 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.79□□□□□ -1.8
CTNSO60931 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.79□□□□□ -1.8
CTNSO60931 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNSO60931 HSFY6P-201ENST00000445573 403 ntBASIC3.79□□□□□ -1.8
CTNSO60931 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.79□□□□□ -1.8
CTNSO60931 AC103987.1-201ENST00000473394 348 ntBASIC3.79□□□□□ -1.8
CTNSO60931 AC068305.1-201ENST00000497406 726 ntBASIC3.79□□□□□ -1.8
CTNSO60931 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.79□□□□□ -1.8
CTNSO60931 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNSO60931 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNSO60931 AC091515.1-201ENST00000548110 679 ntBASIC3.79□□□□□ -1.8
CTNSO60931 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNSO60931 AC091516.1-201ENST00000549191 703 ntBASIC3.79□□□□□ -1.8
CTNSO60931 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.79□□□□□ -1.8
CTNSO60931 AC068714.1-201ENST00000559623 800 ntBASIC3.79□□□□□ -1.8
CTNSO60931 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.79□□□□□ -1.8
CTNSO60931 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTNSO60931 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.79□□□□□ -1.8
CTNSO60931 AC090953.1-201ENST00000604305 1092 ntBASIC3.79□□□□□ -1.8
CTNSO60931 AC012603.1-201ENST00000606424 528 ntBASIC3.79□□□□□ -1.8
CTNSO60931 MIR6868-201ENST00000611215 58 ntBASIC3.79□□□□□ -1.8
CTNSO60931 RNA5SP196-201ENST00000625967 102 ntBASIC3.79□□□□□ -1.8
CTNSO60931 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CTNSO60931 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTNSO60931 MTCO1P14-201ENST00000441695 1559 ntBASIC3.79□□□□□ -1.8
CTNSO60931 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CTNSO60931 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CTNSO60931 ZNF962P-201ENST00000443465 3140 ntBASIC3.79□□□□□ -1.8
CTNSO60931 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTNSO60931 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTNSO60931 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.78□□□□□ -1.8
CTNSO60931 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
CTNSO60931 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CTNSO60931 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.78□□□□□ -1.8
CTNSO60931 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTNSO60931 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CTNSO60931 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
CTNSO60931 SPRR2C-201ENST00000290702 219 ntBASIC3.78□□□□□ -1.8
CTNSO60931 RNU6-618P-201ENST00000363518 112 ntBASIC3.78□□□□□ -1.8
CTNSO60931 RN7SKP227-201ENST00000364445 330 ntBASIC3.78□□□□□ -1.8
CTNSO60931 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms