Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.22□□□□□ -1.73
PRKNO60260 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.22□□□□□ -1.73
PRKNO60260 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
PRKNO60260 ELOCP28-201ENST00000590044 317 ntBASIC4.22□□□□□ -1.73
PRKNO60260 PCNAP1-202ENST00000595299 752 ntBASIC4.22□□□□□ -1.73
PRKNO60260 VN1R78P-201ENST00000597393 564 ntBASIC4.22□□□□□ -1.73
PRKNO60260 MTND3P19-201ENST00000603825 345 ntBASIC4.22□□□□□ -1.73
PRKNO60260 AC115286.1-201ENST00000604298 434 ntBASIC4.22□□□□□ -1.73
PRKNO60260 COX6CP4-201ENST00000605798 228 ntBASIC4.22□□□□□ -1.73
PRKNO60260 VN1R74P-201ENST00000613259 503 ntBASIC4.22□□□□□ -1.73
PRKNO60260 MIR8069-1-201ENST00000616627 86 ntBASIC4.22□□□□□ -1.73
PRKNO60260 MIR8069-2-201ENST00000621412 86 ntBASIC4.22□□□□□ -1.73
PRKNO60260 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.22□□□□□ -1.73
PRKNO60260 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.22□□□□□ -1.73
PRKNO60260 AP003497.2-201ENST00000624220 967 ntBASIC4.22□□□□□ -1.73
PRKNO60260 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.22□□□□□ -1.73
PRKNO60260 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PRKNO60260 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PRKNO60260 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.22□□□□□ -1.73
PRKNO60260 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
PRKNO60260 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
PRKNO60260 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.21□□□□□ -1.73
PRKNO60260 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
PRKNO60260 OR56B2P-202ENST00000641377 2453 ntBASIC4.21□□□□□ -1.73
PRKNO60260 AC120338.1-201ENST00000625074 1541 ntBASIC4.21□□□□□ -1.73
PRKNO60260 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PRKNO60260 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKNO60260 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PRKNO60260 RNY3P9-201ENST00000384727 106 ntBASIC4.21□□□□□ -1.74
PRKNO60260 AC016397.1-201ENST00000412463 242 ntBASIC4.21□□□□□ -1.74
PRKNO60260 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.21□□□□□ -1.74
PRKNO60260 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.21□□□□□ -1.74
PRKNO60260 AC009480.2-201ENST00000422916 432 ntBASIC4.21□□□□□ -1.74
PRKNO60260 RAC1P8-201ENST00000427086 527 ntBASIC4.21□□□□□ -1.74
PRKNO60260 CNOT7P1-201ENST00000429006 852 ntBASIC4.21□□□□□ -1.74
PRKNO60260 RPL7P34-201ENST00000433316 712 ntBASIC4.21□□□□□ -1.74
PRKNO60260 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PRKNO60260 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.21□□□□□ -1.74
PRKNO60260 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.21□□□□□ -1.74
PRKNO60260 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.21□□□□□ -1.74
PRKNO60260 RPS26P30-201ENST00000443431 335 ntBASIC4.21□□□□□ -1.74
PRKNO60260 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.21□□□□□ -1.74
PRKNO60260 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKNO60260 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.21□□□□□ -1.74
PRKNO60260 AC025674.1-201ENST00000507074 324 ntBASIC4.21□□□□□ -1.74
PRKNO60260 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.21□□□□□ -1.74
PRKNO60260 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.21□□□□□ -1.74
PRKNO60260 AC008565.1-201ENST00000509046 885 ntBASIC4.21□□□□□ -1.74
PRKNO60260 AC005351.1-201ENST00000511152 786 ntBASIC4.21□□□□□ -1.74
PRKNO60260 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.21□□□□□ -1.74
PRKNO60260 IGLVIV-65-201ENST00000517313 360 ntBASIC4.21□□□□□ -1.74
PRKNO60260 MRPS36P3-201ENST00000519284 130 ntBASIC4.21□□□□□ -1.74
PRKNO60260 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.21□□□□□ -1.74
PRKNO60260 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.21□□□□□ -1.74
PRKNO60260 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.21□□□□□ -1.74
PRKNO60260 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.21□□□□□ -1.74
PRKNO60260 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.21□□□□□ -1.74
PRKNO60260 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKNO60260 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.21□□□□□ -1.74
PRKNO60260 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.21□□□□□ -1.74
PRKNO60260 AC145350.1-201ENST00000567426 208 ntBASIC4.21□□□□□ -1.74
PRKNO60260 MTND3P13-201ENST00000574391 343 ntBASIC4.21□□□□□ -1.74
PRKNO60260 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.21□□□□□ -1.74
PRKNO60260 RPL26P30-202ENST00000602923 645 ntBASIC4.21□□□□□ -1.74
PRKNO60260 AC025588.2-201ENST00000604851 466 ntBASIC4.21□□□□□ -1.74
PRKNO60260 AC019193.2-201ENST00000610012 634 ntBASIC4.21□□□□□ -1.74
PRKNO60260 MIR378J-201ENST00000611988 109 ntBASIC4.21□□□□□ -1.74
PRKNO60260 AL138478.1-201ENST00000612252 832 ntBASIC4.21□□□□□ -1.74
PRKNO60260 AL121873.1-201ENST00000616013 524 ntBASIC4.21□□□□□ -1.74
PRKNO60260 AC015871.5-202ENST00000623252 701 ntBASIC4.21□□□□□ -1.74
PRKNO60260 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.21□□□□□ -1.74
PRKNO60260 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKNO60260 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKNO60260 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PRKNO60260 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PRKNO60260 AC108751.5-201ENST00000492880 1336 ntBASIC4.21□□□□□ -1.74
PRKNO60260 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKNO60260 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKNO60260 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKNO60260 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
PRKNO60260 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRKNO60260 OR56B2P-201ENST00000317102 954 ntBASIC4.2□□□□□ -1.74
PRKNO60260 RNA5SP447-201ENST00000363749 119 ntBASIC4.2□□□□□ -1.74
PRKNO60260 BMS1P3-201ENST00000372011 932 ntBASIC4.2□□□□□ -1.74
PRKNO60260 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKNO60260 SNORA68.2-201ENST00000391263 128 ntBASIC4.2□□□□□ -1.74
PRKNO60260 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKNO60260 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKNO60260 ELOCP19-201ENST00000411919 318 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKNO60260 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKNO60260 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKNO60260 MOB1AP1-201ENST00000430903 535 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AC016712.1-201ENST00000431088 378 ntBASIC4.2□□□□□ -1.74
PRKNO60260 CDY14P-201ENST00000431260 1014 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms