Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 CYP4F35P-202ENST00000636121 390 ntBASIC4.9□□□□□ -1.63
HMGB1P1B2RPK0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB1P1B2RPK0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGB1P1B2RPK0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGB1P1B2RPK0 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB1P1B2RPK0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 KPNA2P2-201ENST00000419546 1489 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC066616.2-201ENST00000559334 1481 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AL592494.2-201ENST00000425455 1548 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 RNU6-1249P-201ENST00000363237 111 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 SNORD82-201ENST00000365530 70 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 RNU6-1181P-201ENST00000384191 106 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 ARL4AP5-201ENST00000404372 599 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC066692.1-201ENST00000421721 457 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 ELOCP18-201ENST00000434209 337 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AL451139.1-201ENST00000434718 346 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 KF459542.1-201ENST00000450908 553 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 HMGB1P15-201ENST00000453854 435 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 CEACAMP11-201ENST00000455211 583 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 RPL5P24-201ENST00000463742 885 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC010469.1-201ENST00000463864 576 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC010301.1-201ENST00000473936 355 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 HMGB1P22-201ENST00000505315 124 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 RNA5SP135-201ENST00000517019 125 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC010735.1-201ENST00000567305 1026 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC122134.1-202ENST00000569111 1201 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 MRPL45P2-203ENST00000573318 473 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC079315.1-201ENST00000602952 623 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC103710.3-201ENST00000608157 948 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AP005137.2-201ENST00000609238 400 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AC015813.4-201ENST00000610469 179 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 IQCB2P-201ENST00000401788 1633 ntBASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB1P1B2RPK0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 RNU5B-4P-201ENST00000363508 111 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AL049697.2-201ENST00000403708 294 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 RPL23AP26-201ENST00000412728 464 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 MRPS18BP2-201ENST00000434310 759 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 RPL7P28-201ENST00000437739 740 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AC011753.3-201ENST00000443436 406 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 COX6CP18-201ENST00000448769 222 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 TCEA1P1-201ENST00000449716 880 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 PLGLA-201ENST00000465668 449 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 RPS21P4-201ENST00000487122 248 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AC108078.3-201ENST00000502633 489 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AC004062.1-201ENST00000509926 645 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 snoZ278.1-201ENST00000517059 112 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AC006512.2-201ENST00000543250 486 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 ZNF192P1-203ENST00000565888 810 ntBASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGB1P1B2RPK0 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms