Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AC079804.1-201ENST00000461922 436 ntBASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 AC008638.1-201ENST00000506035 866 ntBASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 AC008885.2-201ENST00000509506 930 ntBASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 BNIP3P32-201ENST00000600015 554 ntBASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 AL671309.1-201ENST00000603750 544 ntBASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 AC121761.2-201ENST00000617300 689 ntBASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 MIR6719-201ENST00000622428 87 ntBASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 C2orf27A-204ENST00000623058 969 ntBASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 AC092608.3-201ENST00000625017 386 ntBASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 MIR4496-201ENST00000635896 61 ntBASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF103-CHMP3A0A140T963 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RNF103-CHMP3A0A140T963 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
RNF103-CHMP3A0A140T963 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC125257.1-201ENST00000560400 2930 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 OR51AB1P-201ENST00000429046 620 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 RPL7P4-203ENST00000430239 730 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC004865.1-201ENST00000442276 1003 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AL353718.1-201ENST00000451028 517 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC012671.1-201ENST00000451912 203 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC008280.2-201ENST00000455473 307 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 SNRPGP5-201ENST00000456003 220 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 IGLV2-34-201ENST00000490007 283 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC018797.3-201ENST00000513388 1241 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 OR7H2P-201ENST00000513483 306 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 OR8L1P-201ENST00000534005 955 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 UBTFL9-201ENST00000534504 1148 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC104229.1-201ENST00000561364 255 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 MIR4436B2-201ENST00000581415 91 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 MIR4436B1-201ENST00000583272 91 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC091488.1-201ENST00000604239 660 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AL160290.3-201ENST00000604869 165 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 RNA5SP108-201ENST00000605921 117 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC007546.2-201ENST00000623996 360 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 LINC01808-202ENST00000641680 1116 ntBASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF103-CHMP3A0A140T963 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 XIAPP3-201ENST00000312918 795 ntBASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 RNA5SP307-201ENST00000362863 116 ntBASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 MIR659-201ENST00000384963 97 ntBASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 SNORA11C-201ENST00000408532 129 ntBASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 RN7SKP106-201ENST00000410832 272 ntBASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF103-CHMP3A0A140T963 AC007394.1-201ENST00000421941 531 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms