Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC114947.2-201ENST00000565748 2125 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 SNORD116-4-201ENST00000384733 96 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 NUDT19P3-201ENST00000404698 555 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AL807761.1-201ENST00000417622 171 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 RBMY2QP-201ENST00000429799 1147 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC244035.1-201ENST00000430042 390 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 RPS25P9-201ENST00000435591 252 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 MTCO2P16-201ENST00000436962 677 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC241584.1-201ENST00000438469 1241 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 OR52E3P-201ENST00000452083 936 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 RPL21P71-201ENST00000465598 459 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC080014.1-201ENST00000496877 1201 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC104685.1-201ENST00000502445 371 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 MTATP6P22-201ENST00000507369 598 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC016559.2-201ENST00000510759 359 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 RNU6-488P-201ENST00000515918 99 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 RNU6-1261P-201ENST00000517194 104 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC127381.1-201ENST00000555979 939 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 RPL10P14-201ENST00000565265 298 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC138915.2-201ENST00000569776 97 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC103987.3-201ENST00000582071 292 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC064872.1-201ENST00000604823 1072 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC092653.1-201ENST00000608509 531 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC245297.2-201ENST00000610119 565 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AL133243.1-201ENST00000614487 366 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC243756.2-201ENST00000618406 463 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 MIR6839-201ENST00000620425 113 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 MIR6810-201ENST00000622701 70 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 AC091953.3-201ENST00000623220 236 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 NCLP2-201ENST00000416078 1462 ntBASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AP000473.2-201ENST00000602659 1537 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 Y_RNA.18-201ENST00000362461 102 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 SNORA4.1-201ENST00000364263 144 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AL138880.1-201ENST00000405824 642 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 RNU6-920P-201ENST00000410926 92 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC233981.1-201ENST00000423224 461 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC010153.1-201ENST00000432862 727 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AL161722.2-201ENST00000434731 981 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 RPL23AP35-201ENST00000451906 501 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 NF1P3-201ENST00000457709 450 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC083982.1-201ENST00000485679 344 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC007686.1-201ENST00000488511 463 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AL049874.2-201ENST00000492636 288 ntBASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB1Q9Y5F3 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms