Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 FO393419.3-201ENST00000428741 282 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 YWHAZP7-201ENST00000436906 631 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AL450263.2-201ENST00000439400 589 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AL109741.2-201ENST00000455561 343 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 RPS29P22-201ENST00000472363 168 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 RN7SL814P-201ENST00000487715 300 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC093755.1-201ENST00000512950 1023 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 MTCO2P32-201ENST00000514865 403 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 RNA5SP43-201ENST00000516559 110 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 DUXAP1-201ENST00000556632 463 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC009117.1-201ENST00000563948 554 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC010632.3-201ENST00000611377 369 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC105227.2-201ENST00000615075 605 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC090246.1-201ENST00000616499 426 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC087385.3-201ENST00000620477 187 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC010435.1-201ENST00000623353 1177 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AF246928.1-201ENST00000623768 87 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC009313.2-201ENST00000417893 1941 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AC006210.2-201ENST00000367074 1545 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 KARSP3-201ENST00000571212 1504 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 SDAD1P1-202ENST00000524156 2051 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 Y_RNA.559-201ENST00000384686 107 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 RPL23AP59-201ENST00000399415 461 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AL512430.2-201ENST00000406786 339 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AC098592.1-201ENST00000419352 333 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AC004074.1-201ENST00000421810 1063 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 OR5BE1P-201ENST00000425977 939 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 USP9YP9-201ENST00000429406 715 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 BX276092.6-201ENST00000430476 250 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 TMX2P1-201ENST00000436507 708 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AL354941.1-201ENST00000438600 464 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 MTCYBP34-201ENST00000439552 670 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AC097499.1-201ENST00000444277 208 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 TAF9P1-201ENST00000445421 515 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AC004980.3-201ENST00000447046 365 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 EIF4A1P11-201ENST00000451239 222 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 TAF9P2-201ENST00000454958 515 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 BX276092.8-201ENST00000455722 250 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 MTCYBP19-201ENST00000517463 1124 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 MTND1P5-201ENST00000517906 940 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AC134698.4-201ENST00000523451 826 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 HIGD1AP5-201ENST00000529959 259 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AL049870.4-201ENST00000555741 486 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AL139286.2-201ENST00000606838 396 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AC012557.1-201ENST00000607115 611 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 OR2BH1P-201ENST00000608850 864 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 MIR6798-201ENST00000612887 67 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AC107075.1-201ENST00000613695 314 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 RPL23AP61-201ENST00000623642 466 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AC145207.9-201ENST00000623802 325 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AP003072.4-201ENST00000624580 310 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AC007494.3-201ENST00000624660 743 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms