Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
PHF8Q9UPP1 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
PHF8Q9UPP1 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.71□□□□□ -1.01
PHF8Q9UPP1 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PHF8Q9UPP1 ACTR3BP5-201ENST00000448440 1479 ntBASIC8.71□□□□□ -1.01
PHF8Q9UPP1 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
PHF8Q9UPP1 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
PHF8Q9UPP1 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
PHF8Q9UPP1 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.71□□□□□ -1.01
PHF8Q9UPP1 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
PHF8Q9UPP1 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 RNU6-38P-201ENST00000384085 107 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 Z93019.1-201ENST00000416450 973 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AL139396.1-201ENST00000421137 167 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 BX510359.3-201ENST00000422168 306 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AC007283.2-201ENST00000424739 197 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AL731534.1-201ENST00000434711 269 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 DNAJC19P5-201ENST00000443295 316 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 GAPDHP23-201ENST00000444823 993 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 RPL7P52-201ENST00000449200 742 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AC023141.9-201ENST00000458734 412 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 RNU6-333P-201ENST00000459117 107 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AC034222.1-201ENST00000494052 532 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 SUMO2P20-201ENST00000520803 283 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AC008126.1-201ENST00000549019 480 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AC051619.2-201ENST00000559063 397 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 MIR3942-201ENST00000585264 109 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AC016727.2-201ENST00000603988 621 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AC007485.1-201ENST00000616755 206 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 5S_rRNA.28-201ENST00000638107 119 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 XPOTP1-201ENST00000443317 2398 ntBASIC8.71□□□□□ -1.02
PHF8Q9UPP1 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PHF8Q9UPP1 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 COL6A4P1-202ENST00000487147 4317 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 AL355377.1-201ENST00000621125 1653 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 Y_RNA.117-201ENST00000363294 101 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 Y_RNA.153-201ENST00000363615 91 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 RNU6-26P-201ENST00000383985 107 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 RNU6-954P-201ENST00000411355 107 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 DPH3P2-201ENST00000422618 250 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 AL136981.1-203ENST00000451452 3844 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 RNU7-66P-201ENST00000459469 62 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 RPS26P39-201ENST00000469206 341 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 RPL23AP11-201ENST00000475260 469 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 RN7SL717P-201ENST00000478343 297 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 RNY3P15-201ENST00000516297 97 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 RNA5SP434-201ENST00000516647 121 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 RNU6-566P-201ENST00000516790 107 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 RNU6-1088P-201ENST00000516850 104 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 COX6CP8-201ENST00000522620 226 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 MRO-208ENST00000588444 866 ntTSL 3 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 AL121612.2-201ENST00000612261 482 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 OR52H1-202ENST00000641796 1061 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 LINC02035-201ENST00000610128 5476 ntBASIC8.7□□□□□ -1.02
PHF8Q9UPP1 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
PHF8Q9UPP1 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms