Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 SNORA5A-201ENST00000384111 134 ntBASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 MIR34B-201ENST00000385076 84 ntBASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 SNORD66.1-201ENST00000391230 76 ntBASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 AL691449.1-201ENST00000426570 421 ntBASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 AC104164.2-201ENST00000496953 495 ntBASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 RNU6-1004P-201ENST00000516584 111 ntBASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 SNORA76.2-201ENST00000517095 137 ntBASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 AL353726.1-201ENST00000614041 1000 ntBASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 AL445493.3-201ENST00000619568 477 ntBASIC7.96□□□□□ -1.13
SHROOM4Q9ULL8 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
SHROOM4Q9ULL8 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 OR11H4-201ENST00000315409 1082 ntBASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 HSFY1P1-201ENST00000423928 1178 ntBASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 NPM1P39-201ENST00000449818 867 ntBASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 RPS20P21-201ENST00000466859 343 ntBASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 AC090602.1-201ENST00000469695 252 ntBASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 NPM1P17-201ENST00000479221 602 ntBASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 ACTR3P3-201ENST00000480448 893 ntBASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 GMPSP1-201ENST00000514075 579 ntBASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 AC079148.1-201ENST00000565944 819 ntBASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM4Q9ULL8 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 RNU1-44P-201ENST00000384453 163 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 U8.11-201ENST00000384699 133 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 U8.12-201ENST00000384701 133 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 SNORA40.4-201ENST00000390971 128 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 MORF4L1P7-201ENST00000426038 703 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 RPL23AP23-201ENST00000452590 471 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 AC002553.2-201ENST00000453217 340 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 U8.18-201ENST00000459285 133 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 AC005412.1-201ENST00000580812 1049 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 SMG1P4-204ENST00000523028 4131 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 USP9YP4-201ENST00000424401 1745 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 NPM1P34-201ENST00000428821 893 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 CEACAMP1-201ENST00000434624 1035 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 PPIAP13-201ENST00000434706 478 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 RPS27AP15-201ENST00000447672 466 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 AC107398.1-201ENST00000486904 505 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 AC108471.1-201ENST00000513977 287 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 AL354798.1-201ENST00000622505 329 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 AP006248.3-201ENST00000623580 594 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 CFTRP2-201ENST00000634304 199 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 U6.105-201ENST00000637379 88 ntBASIC7.94□□□□□ -1.14
SHROOM4Q9ULL8 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 RNA5SP72-201ENST00000364442 117 ntBASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 RNU6-213P-201ENST00000384051 104 ntBASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 HMGB1P10-201ENST00000395823 563 ntBASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms