Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MTND4P24-201ENST00000424002 397 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC073335.1-201ENST00000427776 363 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AL160175.1-201ENST00000428124 247 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 RPL21P89-201ENST00000444021 467 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 FGF7P3-201ENST00000454645 303 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC099560.2-201ENST00000457554 255 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 RN7SL817P-201ENST00000480777 288 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 METTL15P1-201ENST00000481421 1045 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC093663.2-201ENST00000484625 313 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC093824.1-201ENST00000508796 343 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC107918.3-201ENST00000533272 382 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 PDCD5P1-201ENST00000543528 309 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC027176.2-201ENST00000559166 746 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC007342.8-201ENST00000623278 678 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 USP9YP4-201ENST00000424401 1745 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC092162.3-201ENST00000624511 1624 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 RLIMP1-201ENST00000339626 1680 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AC093535.2-201ENST00000624769 2326 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AC067945.1-201ENST00000342609 618 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AP000357.1-201ENST00000409926 1165 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 RNU6-628P-201ENST00000410675 107 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 TRGV6-201ENST00000417928 299 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AC115285.1-201ENST00000424879 736 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 FAR1P1-201ENST00000427163 934 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 PRELID3BP10-201ENST00000431957 584 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 ELOCP10-201ENST00000440624 327 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AC006011.1-201ENST00000442758 349 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AL162151.2-201ENST00000448875 158 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 HMGB1P26-201ENST00000452520 628 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 RPL38P1-201ENST00000460914 211 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 TPT1P3-201ENST00000492841 512 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AC008694.2-201ENST00000517591 306 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AC100770.1-201ENST00000532310 322 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AC123786.2-201ENST00000603459 275 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 ELOCP34-201ENST00000604436 327 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 uc_338.9-201ENST00000617424 182 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 HSPD1P11-201ENST00000508643 1702 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 IQCB2P-201ENST00000401788 1633 ntBASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLCF1Q9UBD9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 RNU1-15P-201ENST00000353977 144 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 RN7SKP280-201ENST00000364196 304 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 RNA5SP513-201ENST00000364648 118 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AC105402.1-201ENST00000413336 545 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 PDSS1P1-201ENST00000422953 1114 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms