Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 VN1R87P-201ENST00000596706 487 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AP001160.4-201ENST00000596971 382 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AL359535.1-201ENST00000612100 1087 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC022079.2-201ENST00000619739 566 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC007275.1-201ENST00000621243 671 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC010872.1-201ENST00000624225 675 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC006065.6-201ENST00000625201 545 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 OR56B2P-202ENST00000641377 2453 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC091046.3-201ENST00000631455 1574 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 RNA5SP307-201ENST00000362863 116 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 MIR585-201ENST00000384887 94 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 MIR129-1-201ENST00000384972 72 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 MIR937-201ENST00000401271 86 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 NUP35P2-201ENST00000416748 943 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 ARF4P4-201ENST00000439608 520 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 UBE2V1P3-201ENST00000439651 417 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 RPS26P30-201ENST00000443431 335 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 RPS27AP15-201ENST00000447672 466 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AL162591.2-201ENST00000449634 317 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 RPL23AP15-201ENST00000450202 459 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 DDX39BP2-208ENST00000453923 258 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 RPS29P33-201ENST00000456717 146 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 RPS4XP12-201ENST00000461747 709 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 RPS20P21-201ENST00000466859 343 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 RPL23AP65-201ENST00000475608 468 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC091959.2-201ENST00000477363 321 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC007686.1-201ENST00000488511 463 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC108022.1-201ENST00000493466 478 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC111000.3-201ENST00000508057 576 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AP003066.2-201ENST00000529375 555 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC068831.4-201ENST00000556118 109 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 BPTFP1-201ENST00000579209 492 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC008507.2-201ENST00000588402 1176 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC013468.1-201ENST00000608680 598 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC124016.2-201ENST00000610058 665 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC012409.3-201ENST00000611343 981 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 uc_338.18-201ENST00000615451 175 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 ZNF33CP-201ENST00000432492 2030 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 MAPK10-303ENST00000641324 3959 ntBASIC4.97□□□□□ -1.61
BLOC1S4Q9NUP1 AC011978.2-201ENST00000569835 2054 ntBASIC4.96□□□□□ -1.61
BLOC1S4Q9NUP1 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
BLOC1S4Q9NUP1 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 RNU5B-1-201ENST00000363286 116 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 RNU6-1151P-201ENST00000384684 107 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AC136624.1-201ENST00000400791 413 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 SNRPFP1-201ENST00000414761 252 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 TMSB10P2-201ENST00000416049 131 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AC119751.6-201ENST00000416712 186 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 PTP4A1P7-201ENST00000423476 514 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms