Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 RPL23AP71-201ENST00000470966 469 ntBASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AC135999.1-201ENST00000478962 479 ntBASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 ACTR3P3-201ENST00000480448 893 ntBASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 BNIP3P22-201ENST00000593399 556 ntBASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AC069200.1-201ENST00000609511 323 ntBASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AL049781.1-201ENST00000623195 3585 ntBASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AC007068.1-201ENST00000396690 844 ntBASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AL390879.2-203ENST00000426943 1121 ntBASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AC084198.1-201ENST00000477747 402 ntBASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AC093853.1-201ENST00000515689 483 ntBASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 RNA5SP154-201ENST00000516193 111 ntBASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AL390816.3-201ENST00000604527 1066 ntBASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 AC015967.1-201ENST00000619893 476 ntBASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC3.43□□□□□ -1.86
KIAA1549Q9HCM3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 SNORD3H-201ENST00000384486 214 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 SNORA3.3-201ENST00000408712 125 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 TCEA1P2-201ENST00000420496 906 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 USP12PY-201ENST00000427677 1064 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AL360157.1-201ENST00000565962 87 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AC008739.3-201ENST00000603262 127 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AC024220.1-201ENST00000603675 484 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AL451086.1-201ENST00000605596 223 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AC128687.2-201ENST00000609657 566 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 MIR4727-201ENST00000622232 55 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 SNORA63.1-201ENST00000362493 131 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AC098824.1-201ENST00000453565 980 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 CYCSP53-201ENST00000455540 265 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 RPL7P15-201ENST00000461190 712 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 RPL7L1P8-201ENST00000469911 741 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 KLKP1-201ENST00000595979 403 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AC124856.1-201ENST00000600819 896 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 RMST_9.1-201ENST00000619945 193 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 AC015722.2-201ENST00000622210 551 ntBASIC3.42□□□□□ -1.86
KIAA1549Q9HCM3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 Z82217.1-201ENST00000625157 8149 ntBASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms