Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 PABPC1P7-201ENST00000413177 1513 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC027088.4-201ENST00000611559 1947 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 RN7SKP224-201ENST00000364140 325 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 SNORA43.1-201ENST00000364863 140 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 RNU6-1207P-201ENST00000384343 107 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 SNORA70.9-201ENST00000384370 135 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 UBE2V1P14-201ENST00000415815 558 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 BX284632.2-201ENST00000421091 399 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 EIF1P1-201ENST00000421436 341 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC104837.2-201ENST00000427236 424 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AL031667.1-201ENST00000440222 725 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 NANOGNBP1-201ENST00000448444 480 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC126182.1-201ENST00000478134 357 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 RPL7P51-201ENST00000490532 749 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC011005.3-201ENST00000491624 395 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 GTF2F2P1-201ENST00000511083 675 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC110775.1-201ENST00000513721 462 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AP000648.1-201ENST00000529682 397 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC034268.2-201ENST00000571784 482 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 RN7SL753P-201ENST00000581238 290 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 CKS1BP3-201ENST00000600888 237 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC121334.2-201ENST00000605387 271 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 MIR6809-201ENST00000612189 116 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 U4.5-201ENST00000617137 123 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC079597.1-201ENST00000624306 508 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 PISRT1-201ENST00000626175 531 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC095050.2-201ENST00000510748 1458 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AC093535.2-201ENST00000624769 2326 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 AL359976.1-201ENST00000418655 3528 ntBASIC6.7□□□□□ -1.34
TRAIPQ9BWF2 EIF2AP4-201ENST00000424793 1781 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 RN7SKP292-201ENST00000365522 317 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 PGBD4P3-201ENST00000440731 581 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 RPL17P49-201ENST00000443728 411 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC073109.1-201ENST00000445066 978 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC092967.1-201ENST00000449016 481 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 TCEA1P1-201ENST00000449716 880 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 IGHV5-78-201ENST00000450948 295 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 HLA-DPA3-207ENST00000454398 229 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 RN7SL193P-201ENST00000491708 276 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC006390.1-201ENST00000508068 283 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC093815.1-201ENST00000508637 280 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC010493.1-201ENST00000513479 292 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 Y_RNA.667-201ENST00000516212 107 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 RNU6-430P-201ENST00000517078 107 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 MTCO2P4-201ENST00000517968 247 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC112191.2-201ENST00000522428 333 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms