Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC147055.3-201ENST00000510547 851 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AC010342.1-201ENST00000514047 877 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AC112198.4-201ENST00000515450 351 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 RNU6-1231P-201ENST00000517185 103 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 UBE2FP2-201ENST00000566646 462 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AC011458.1-201ENST00000604034 617 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AC112503.2-201ENST00000609005 552 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AC005156.1-201ENST00000613371 573 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AC021106.3-201ENST00000623925 531 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 RNU6-146P-201ENST00000384602 108 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 MIR298-201ENST00000401212 88 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 AL158050.1-201ENST00000416077 457 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 AL512661.1-201ENST00000434586 1253 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 ELOCP10-201ENST00000440624 327 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 RPL31P44-201ENST00000447680 377 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 AL162591.2-201ENST00000449634 317 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 SETP6-201ENST00000479329 568 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 RNU6-334P-201ENST00000517072 102 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 IGKV1-32-201ENST00000519290 311 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 AP001781.1-201ENST00000530977 207 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 AP003117.1-201ENST00000602771 554 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 ELOCP34-201ENST00000604436 327 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 AL391834.2-201ENST00000609982 546 ntBASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC28BQ9BUN5 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 C4BPAP1-201ENST00000415474 1893 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 LINC00561-201ENST00000565815 2738 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC106871.1-201ENST00000568324 3102 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 RNU1-18P-201ENST00000363062 164 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 RNU1-130P-201ENST00000363930 160 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 HMGB1P10-201ENST00000395823 563 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AL049697.2-201ENST00000403708 294 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AL136131.1-201ENST00000406079 803 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 RNA5SP239-201ENST00000410218 129 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 RNU4-27P-201ENST00000410889 139 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 RNU4-74P-201ENST00000411280 161 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 RNU6-603P-201ENST00000411403 107 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 RPL6P29-201ENST00000414863 865 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 MTCO2P1-201ENST00000424648 477 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 NDUFA5P10-201ENST00000432147 357 ntBASIC4.11□□□□□ -1.75
CCDC28BQ9BUN5 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms