Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
ABCA3Q99758 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.9□□□□□ -1.62
ABCA3Q99758 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.9□□□□□ -1.62
ABCA3Q99758 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
ABCA3Q99758 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
ABCA3Q99758 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC4.9□□□□□ -1.62
ABCA3Q99758 AC245054.1-201ENST00000420944 258 ntBASIC4.9□□□□□ -1.62
ABCA3Q99758 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.9□□□□□ -1.62
ABCA3Q99758 RPL7P44-201ENST00000424827 742 ntBASIC4.9□□□□□ -1.62
ABCA3Q99758 AL645931.1-201ENST00000439737 410 ntBASIC4.9□□□□□ -1.62
ABCA3Q99758 RPL7P23-201ENST00000493874 747 ntBASIC4.9□□□□□ -1.62
ABCA3Q99758 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.9□□□□□ -1.62
ABCA3Q99758 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ABCA3Q99758 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.9□□□□□ -1.62
ABCA3Q99758 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.9□□□□□ -1.62
ABCA3Q99758 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.9□□□□□ -1.62
ABCA3Q99758 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
ABCA3Q99758 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
ABCA3Q99758 LINC01109-201ENST00000603837 3081 ntBASIC4.9□□□□□ -1.63
ABCA3Q99758 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ABCA3Q99758 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
ABCA3Q99758 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ABCA3Q99758 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ABCA3Q99758 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ABCA3Q99758 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ABCA3Q99758 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.89□□□□□ -1.63
ABCA3Q99758 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ABCA3Q99758 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ABCA3Q99758 RNA5SP197-201ENST00000363357 119 ntBASIC4.89□□□□□ -1.63
ABCA3Q99758 AC011742.1-201ENST00000431448 434 ntBASIC4.89□□□□□ -1.63
ABCA3Q99758 PSMC1P13-201ENST00000458195 985 ntBASIC4.89□□□□□ -1.63
ABCA3Q99758 RPL5P23-201ENST00000496040 868 ntBASIC4.89□□□□□ -1.63
ABCA3Q99758 AP000255.1-201ENST00000610276 676 ntBASIC4.89□□□□□ -1.63
ABCA3Q99758 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ABCA3Q99758 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.89□□□□□ -1.63
ABCA3Q99758 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
ABCA3Q99758 AL133383.2-201ENST00000622958 2336 ntBASIC4.89□□□□□ -1.63
ABCA3Q99758 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.89□□□□□ -1.63
ABCA3Q99758 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.89□□□□□ -1.63
ABCA3Q99758 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
ABCA3Q99758 RPL12P46-201ENST00000436610 195 ntBASIC4.89□□□□□ -1.63
ABCA3Q99758 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.89□□□□□ -1.63
ABCA3Q99758 AC080014.1-201ENST00000496877 1201 ntBASIC4.89□□□□□ -1.63
ABCA3Q99758 PTGES3P3-201ENST00000511479 482 ntBASIC4.89□□□□□ -1.63
ABCA3Q99758 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.89□□□□□ -1.63
ABCA3Q99758 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ABCA3Q99758 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.89□□□□□ -1.63
ABCA3Q99758 AC026979.4-201ENST00000606555 645 ntBASIC4.89□□□□□ -1.63
ABCA3Q99758 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.89□□□□□ -1.63
ABCA3Q99758 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
ABCA3Q99758 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.88□□□□□ -1.63
ABCA3Q99758 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ABCA3Q99758 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCA3Q99758 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ABCA3Q99758 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
ABCA3Q99758 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ABCA3Q99758 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCA3Q99758 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ABCA3Q99758 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCA3Q99758 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCA3Q99758 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.88□□□□□ -1.63
ABCA3Q99758 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
ABCA3Q99758 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ABCA3Q99758 UBA52P6-201ENST00000399822 382 ntBASIC4.88□□□□□ -1.63
ABCA3Q99758 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.88□□□□□ -1.63
ABCA3Q99758 AL831737.1-201ENST00000441288 271 ntBASIC4.88□□□□□ -1.63
ABCA3Q99758 NANOGNBP1-201ENST00000448444 480 ntBASIC4.88□□□□□ -1.63
ABCA3Q99758 AC037198.2-201ENST00000478845 733 ntBASIC4.88□□□□□ -1.63
ABCA3Q99758 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.88□□□□□ -1.63
ABCA3Q99758 AC023161.2-201ENST00000551218 780 ntBASIC4.88□□□□□ -1.63
ABCA3Q99758 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.88□□□□□ -1.63
ABCA3Q99758 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.88□□□□□ -1.63
ABCA3Q99758 AL133247.2-201ENST00000603236 482 ntBASIC4.88□□□□□ -1.63
ABCA3Q99758 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.88□□□□□ -1.63
ABCA3Q99758 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.88□□□□□ -1.63
ABCA3Q99758 AC026422.1-201ENST00000623961 452 ntBASIC4.88□□□□□ -1.63
ABCA3Q99758 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.88□□□□□ -1.63
ABCA3Q99758 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ABCA3Q99758 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
ABCA3Q99758 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ABCA3Q99758 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCA3Q99758 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.87□□□□□ -1.63
ABCA3Q99758 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.87□□□□□ -1.63
ABCA3Q99758 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ABCA3Q99758 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ABCA3Q99758 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ABCA3Q99758 RNA5SP424-201ENST00000390988 115 ntBASIC4.87□□□□□ -1.63
ABCA3Q99758 RPF2P1-201ENST00000424137 906 ntBASIC4.87□□□□□ -1.63
ABCA3Q99758 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
ABCA3Q99758 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.87□□□□□ -1.63
ABCA3Q99758 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ABCA3Q99758 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ABCA3Q99758 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ABCA3Q99758 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ABCA3Q99758 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.87□□□□□ -1.63
ABCA3Q99758 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
ABCA3Q99758 GVINP1-202ENST00000531871 7271 ntBASIC4.87□□□□□ -1.63
ABCA3Q99758 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
ABCA3Q99758 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
ABCA3Q99758 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms