Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RNU6-1029P-201ENST00000384109 107 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 Y_RNA.463-201ENST00000384271 102 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 RNU6-441P-201ENST00000384545 106 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 CYCSP17-201ENST00000407870 315 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 RNU6ATAC23P-201ENST00000408448 123 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HLA-CQ95604 OSTCP4-201ENST00000424397 449 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-CQ95604 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.03□□□□□ -1.28
HLA-CQ95604 AC013399.1-201ENST00000450311 418 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 AC108059.3-201ENST00000456388 214 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 AC092451.1-201ENST00000480211 153 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-CQ95604 AC025458.1-201ENST00000506046 166 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 AC116655.1-201ENST00000508324 901 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-CQ95604 Y_RNA.721-201ENST00000517207 102 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC7.03□□□□□ -1.28
HLA-CQ95604 MAL2-208ENST00000523307 556 ntTSL 4 BASIC7.03□□□□□ -1.28
HLA-CQ95604 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HLA-CQ95604 GNAI2P1-201ENST00000541815 315 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 AC079905.1-201ENST00000549280 475 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-CQ95604 AC113195.1-201ENST00000579952 141 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
HLA-CQ95604 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC7.03□□□□□ -1.28
HLA-CQ95604 AL035410.2-201ENST00000604963 864 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 RPSAP75-201ENST00000605848 301 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 Z82243.1-201ENST00000609432 473 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 AC022467.1-201ENST00000614738 749 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 AC007485.1-201ENST00000616755 206 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.03□□□□□ -1.28
HLA-CQ95604 AC129915.3-201ENST00000634128 948 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 AL669831.3-213ENST00000636676 183 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HLA-CQ95604 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-CQ95604 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-CQ95604 TATDN2P3-201ENST00000452855 3665 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-CQ95604 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-CQ95604 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.03□□□□□ -1.28
HLA-CQ95604 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.03□□□□□ -1.28
HLA-CQ95604 API5P2-201ENST00000397055 1498 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-CQ95604 LPAL2-203ENST00000454031 2498 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-CQ95604 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-CQ95604 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
HLA-CQ95604 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-CQ95604 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC7.03□□□□□ -1.28
HLA-CQ95604 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC7.03□□□□□ -1.28
HLA-CQ95604 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
HLA-CQ95604 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
HLA-CQ95604 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.28
HLA-CQ95604 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-CQ95604 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-CQ95604 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-CQ95604 CASC19-246ENST00000641625 1606 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-CQ95604 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.02□□□□□ -1.29
HLA-CQ95604 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.02□□□□□ -1.29
HLA-CQ95604 OR51A10P-201ENST00000307165 937 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HLA-CQ95604 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC7.02□□□□□ -1.29
HLA-CQ95604 RNY3P13-201ENST00000365542 102 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 SNORA75B-201ENST00000384053 137 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 EIF4E2P1-201ENST00000393781 255 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AC016769.3-201ENST00000396562 315 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-CQ95604 AL359643.1-201ENST00000404109 423 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AL024474.1-201ENST00000404655 591 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 Y_RNA.646-201ENST00000410980 101 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 RPL7P10-201ENST00000417407 739 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 RPL36AP36-201ENST00000418616 301 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AL590609.2-201ENST00000421430 368 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 MTND6P12-201ENST00000428247 522 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 SNAP23P1-201ENST00000433229 246 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 ZDHHC20P1-204ENST00000435787 423 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-CQ95604 UBE2V1P13-201ENST00000436983 439 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-CQ95604 MED28P3-201ENST00000444288 531 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.02□□□□□ -1.29
HLA-CQ95604 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC7.02□□□□□ -1.29
HLA-CQ95604 RBMY2TP-201ENST00000451162 947 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-CQ95604 HMGB1P4-201ENST00000455362 567 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 SIAH1P1-201ENST00000479411 923 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AC066616.1-201ENST00000486795 413 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 GM2AP2-201ENST00000491764 562 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AC018645.1-201ENST00000505003 109 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
HLA-CQ95604 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-CQ95604 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC7.02□□□□□ -1.29
HLA-CQ95604 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-CQ95604 SNORD46.2-201ENST00000516021 102 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 RN7SKP35-201ENST00000517210 151 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AC103843.2-201ENST00000530523 682 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC7.02□□□□□ -1.29
HLA-CQ95604 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms