Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC097372.4-201ENST00000625025 466 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AL049536.1-201ENST00000625043 744 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 MAPK10-372ENST00000641954 3413 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 LINC02471-203ENST00000641941 4752 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC025125.1-201ENST00000624743 1922 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC006042.3-201ENST00000454684 1469 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AL590763.1-201ENST00000398297 1545 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 SDAD1P1-202ENST00000524156 2051 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 MIR765-201ENST00000390226 114 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 SNORD66.1-201ENST00000391230 76 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 RNA5SP39-201ENST00000411245 120 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 RN7SKP273-201ENST00000411392 314 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 COX6B1P1-201ENST00000415962 213 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 RBMY2QP-201ENST00000429799 1147 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 UBE2V1P6-201ENST00000430840 422 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 RPS24P8-201ENST00000431490 402 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 CEACAMP1-201ENST00000434624 1035 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 RPL7P29-201ENST00000437151 728 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 RPL23AP89-201ENST00000439324 255 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 RPS27P5-201ENST00000444247 244 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 IGKV2-36-201ENST00000519999 223 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 OR5AK3P-201ENST00000527486 1297 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 AC098935.2-201ENST00000604222 466 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 SUMO2P15-201ENST00000604285 278 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 AC012603.1-201ENST00000606424 528 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 FP325313.1-201ENST00000638228 703 ntBASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC71LQ8N9Z2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC71LQ8N9Z2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC71LQ8N9Z2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CCDC71LQ8N9Z2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC71LQ8N9Z2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC016588.2-201ENST00000632484 3021 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 RNA5SP191-201ENST00000362585 102 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 RNA5SP123-201ENST00000363244 119 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 RNU6-792P-201ENST00000363490 107 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 SNORD6-201ENST00000365444 73 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 RNA5SP167-201ENST00000365461 116 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 GLULP6-201ENST00000399502 913 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 MIR1179-201ENST00000408703 91 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 RN7SKP213-201ENST00000410746 298 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 RNA5SP306-201ENST00000411087 107 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 RN7SKP100-201ENST00000411258 284 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 RPL23AP26-201ENST00000412728 464 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 VTA1P1-201ENST00000414044 866 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 TCEA1P4-201ENST00000415066 844 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC005189.1-201ENST00000431286 310 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AL512661.1-201ENST00000434586 1253 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 PTMAP6-201ENST00000439110 327 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 TPMTP4-201ENST00000450749 678 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms