Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC120036.2-201ENST00000509729 1474 ntBASIC5.14□□□□□ -1.59
XRN1Q8IZH2 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
XRN1Q8IZH2 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
XRN1Q8IZH2 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
XRN1Q8IZH2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.13□□□□□ -1.59
XRN1Q8IZH2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
XRN1Q8IZH2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
XRN1Q8IZH2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.13□□□□□ -1.59
XRN1Q8IZH2 OR51A6P-201ENST00000418680 1004 ntBASIC5.13□□□□□ -1.59
XRN1Q8IZH2 AC127537.2-201ENST00000439258 465 ntBASIC5.13□□□□□ -1.59
XRN1Q8IZH2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.13□□□□□ -1.59
XRN1Q8IZH2 UBTFL9-201ENST00000534504 1148 ntBASIC5.13□□□□□ -1.59
XRN1Q8IZH2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.13□□□□□ -1.59
XRN1Q8IZH2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.13□□□□□ -1.59
XRN1Q8IZH2 MIR7112-201ENST00000616126 65 ntBASIC5.13□□□□□ -1.59
XRN1Q8IZH2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
XRN1Q8IZH2 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
XRN1Q8IZH2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
XRN1Q8IZH2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
XRN1Q8IZH2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
XRN1Q8IZH2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
XRN1Q8IZH2 SNORD17-201ENST00000390930 237 ntBASIC5.12□□□□□ -1.59
XRN1Q8IZH2 RNA5SP424-201ENST00000390988 115 ntBASIC5.12□□□□□ -1.59
XRN1Q8IZH2 AGGF1P3-201ENST00000493675 1213 ntBASIC5.12□□□□□ -1.59
XRN1Q8IZH2 TCP11X3P-202ENST00000514289 1254 ntBASIC5.12□□□□□ -1.59
XRN1Q8IZH2 HIGD1AP18-201ENST00000520730 278 ntBASIC5.12□□□□□ -1.59
XRN1Q8IZH2 AC024224.1-201ENST00000538284 609 ntBASIC5.12□□□□□ -1.59
XRN1Q8IZH2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.12□□□□□ -1.59
XRN1Q8IZH2 AC068790.5-201ENST00000602741 355 ntBASIC5.12□□□□□ -1.59
XRN1Q8IZH2 AC010591.1-201ENST00000603941 649 ntBASIC5.12□□□□□ -1.59
XRN1Q8IZH2 CR392039.4-201ENST00000624968 501 ntBASIC5.12□□□□□ -1.59
XRN1Q8IZH2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
XRN1Q8IZH2 AC010300.1-201ENST00000600671 5134 ntBASIC5.12□□□□□ -1.59
XRN1Q8IZH2 AC092435.3-201ENST00000565538 3654 ntBASIC5.12□□□□□ -1.59
XRN1Q8IZH2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
XRN1Q8IZH2 BDP1P-201ENST00000582658 1990 ntBASIC5.12□□□□□ -1.59
XRN1Q8IZH2 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.12□□□□□ -1.59
XRN1Q8IZH2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
XRN1Q8IZH2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.12□□□□□ -1.59
XRN1Q8IZH2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
XRN1Q8IZH2 OR51C1P-202ENST00000641159 1444 ntBASIC5.12□□□□□ -1.59
XRN1Q8IZH2 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
XRN1Q8IZH2 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
XRN1Q8IZH2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
XRN1Q8IZH2 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 RNA5SP52-201ENST00000362448 134 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 RNU1-108P-201ENST00000362556 161 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 RNA5SP306-201ENST00000411087 107 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 AC245054.1-201ENST00000420944 258 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 PHBP14-201ENST00000512887 367 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 AC090877.1-201ENST00000561418 344 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 AL354976.1-201ENST00000613843 387 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 UBE3AP2-201ENST00000429033 2259 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 AL645931.1-201ENST00000439737 410 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 UBE2DNL-203ENST00000474922 222 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 MIR5186-201ENST00000577504 120 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 AC125494.3-201ENST00000602759 455 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 AL390816.3-201ENST00000604527 1066 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 AP000255.1-201ENST00000610276 676 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 ATE1-AS1-202ENST00000636460 506 ntBASIC5.11□□□□□ -1.59
XRN1Q8IZH2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
XRN1Q8IZH2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 SNORA48.5-201ENST00000391143 135 ntBASIC5.1□□□□□ -1.59
XRN1Q8IZH2 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 AC236972.1-201ENST00000433225 199 ntBASIC5.1□□□□□ -1.59
XRN1Q8IZH2 RN7SL807P-201ENST00000470923 297 ntBASIC5.1□□□□□ -1.59
XRN1Q8IZH2 AC022795.1-201ENST00000473808 480 ntBASIC5.1□□□□□ -1.59
XRN1Q8IZH2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
XRN1Q8IZH2 AC063952.1-203ENST00000634410 658 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms