Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
LYSMD3Q7Z3D4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.6□□□□□ -1.35
LYSMD3Q7Z3D4 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LYSMD3Q7Z3D4 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LYSMD3Q7Z3D4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
LYSMD3Q7Z3D4 AC104118.1-201ENST00000607625 1589 ntBASIC6.6□□□□□ -1.35
LYSMD3Q7Z3D4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
LYSMD3Q7Z3D4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LYSMD3Q7Z3D4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
LYSMD3Q7Z3D4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LYSMD3Q7Z3D4 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LYSMD3Q7Z3D4 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LYSMD3Q7Z3D4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.6□□□□□ -1.35
LYSMD3Q7Z3D4 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 RNY1P12-201ENST00000364251 105 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 Y_RNA.373-201ENST00000365600 103 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 RNU1-46P-201ENST00000384425 164 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC078974.1-201ENST00000411597 223 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AL359092.1-201ENST00000417156 265 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 TXNP1-201ENST00000441872 371 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AL035666.1-201ENST00000446195 348 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC091885.1-201ENST00000506658 268 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 RNU6-714P-201ENST00000516963 103 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 IGLV3-6-201ENST00000523937 250 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC092332.1-201ENST00000563684 829 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC090312.1-201ENST00000580637 348 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC121334.2-201ENST00000605387 271 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC018690.1-201ENST00000608144 626 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 AC010401.2-201ENST00000575137 4934 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 VPS35P1-201ENST00000563400 1518 ntBASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.59□□□□□ -1.35
LYSMD3Q7Z3D4 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
LYSMD3Q7Z3D4 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
LYSMD3Q7Z3D4 MTND5P27-201ENST00000428871 1720 ntBASIC6.59□□□□□ -1.36
LYSMD3Q7Z3D4 AL662795.2-201ENST00000624252 3706 ntBASIC6.59□□□□□ -1.36
LYSMD3Q7Z3D4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
LYSMD3Q7Z3D4 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 ZNF652P1-201ENST00000442420 1309 ntBASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 AF287957.1-201ENST00000607368 1595 ntBASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 AC005618.1-201ENST00000606901 3148 ntBASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 RNU5E-8P-201ENST00000363502 116 ntBASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 RNU6-952P-201ENST00000391164 108 ntBASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 MIR548K-201ENST00000408406 116 ntBASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 RNU6-193P-201ENST00000410977 107 ntBASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 AC017035.1-201ENST00000411999 1115 ntBASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 AL596448.1-201ENST00000415024 392 ntBASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 RPL31P12-201ENST00000422587 358 ntBASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 AC119618.1-201ENST00000434191 222 ntBASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 GAPDHP37-201ENST00000442317 968 ntBASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 H2AFZP6-201ENST00000444403 394 ntBASIC6.58□□□□□ -1.36
LYSMD3Q7Z3D4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms