Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 AC008885.1-201ENST00000514930 301 ntBASIC2.95□□□□□ -1.94
VPS13CQ709C8 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13CQ709C8 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13CQ709C8 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13CQ709C8 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13CQ709C8 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13CQ709C8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.95□□□□□ -1.94
VPS13CQ709C8 AC010740.1-201ENST00000417035 684 ntBASIC2.95□□□□□ -1.94
VPS13CQ709C8 RNF19BPX-201ENST00000426224 625 ntBASIC2.95□□□□□ -1.94
VPS13CQ709C8 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 AC138938.1-201ENST00000515431 782 ntBASIC2.95□□□□□ -1.94
VPS13CQ709C8 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 AC004656.1-201ENST00000568479 4951 ntBASIC2.95□□□□□ -1.94
VPS13CQ709C8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13CQ709C8 RN7SKP53-201ENST00000411337 315 ntBASIC2.95□□□□□ -1.94
VPS13CQ709C8 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 DNAJC19P8-201ENST00000452887 259 ntBASIC2.95□□□□□ -1.94
VPS13CQ709C8 RN7SKP46-201ENST00000515942 234 ntBASIC2.95□□□□□ -1.94
VPS13CQ709C8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 AC005344.1-201ENST00000613391 459 ntBASIC2.95□□□□□ -1.94
VPS13CQ709C8 AC010168.2-201ENST00000562691 5428 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13CQ709C8 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13CQ709C8 BTBD10P1-201ENST00000549824 1352 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13CQ709C8 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13CQ709C8 SNORA44-201ENST00000384584 132 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 AC093732.2-201ENST00000607950 274 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13CQ709C8 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13CQ709C8 AC010266.2-201ENST00000564741 3255 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13CQ709C8 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 RPL36AP10-201ENST00000421785 322 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 VTI1BP4-201ENST00000427516 527 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 RPL23AP89-201ENST00000439324 255 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 LSM3P2-201ENST00000551246 273 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 AL354760.1-201ENST00000608357 643 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 RNVU1-4-201ENST00000612985 164 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 AC026422.1-201ENST00000623961 452 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13CQ709C8 FTX-210ENST00000603037 8347 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13CQ709C8 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13CQ709C8 AL021877.2-201ENST00000624442 10684 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 AC107083.1-201ENST00000439643 279 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 AC026333.2-201ENST00000542164 106 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 AC008011.1-201ENST00000545989 227 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS13CQ709C8 AC006386.2-201ENST00000624491 75 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 AC012005.1-201ENST00000624575 75 ntBASIC2.94□□□□□ -1.94
VPS13CQ709C8 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS13CQ709C8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS13CQ709C8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS13CQ709C8 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VPS13CQ709C8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS13CQ709C8 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC2.93□□□□□ -1.94
VPS13CQ709C8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
VPS13CQ709C8 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS13CQ709C8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS13CQ709C8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS13CQ709C8 OR56A5-201ENST00000340110 738 ntBASIC2.93□□□□□ -1.94
VPS13CQ709C8 ZYG11AP1-201ENST00000430329 837 ntBASIC2.93□□□□□ -1.94
VPS13CQ709C8 GEMIN8P3-201ENST00000445417 720 ntBASIC2.93□□□□□ -1.94
VPS13CQ709C8 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS13CQ709C8 AL390838.2-201ENST00000602394 274 ntBASIC2.93□□□□□ -1.94
VPS13CQ709C8 AC104763.2-201ENST00000604179 382 ntBASIC2.93□□□□□ -1.94
VPS13CQ709C8 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS13CQ709C8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS13CQ709C8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VPS13CQ709C8 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS13CQ709C8 SAGE2P-201ENST00000420011 2126 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms