Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC090312.1-201ENST00000580637 348 ntBASIC2.52□□□□□ -2.01
RPL39P62891 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.52□□□□□ -2.01
RPL39P62891 CCT8P1-201ENST00000413611 1657 ntBASIC2.52□□□□□ -2.01
RPL39P62891 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.52□□□□□ -2.01
RPL39P62891 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RPL39P62891 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPL39P62891 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPL39P62891 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPL39P62891 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.52□□□□□ -2.01
RPL39P62891 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RPL39P62891 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPL39P62891 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
RPL39P62891 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
RPL39P62891 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RPL39P62891 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RPL39P62891 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.51□□□□□ -2.01
RPL39P62891 AC103591.2-201ENST00000265259 766 ntBASIC2.51□□□□□ -2.01
RPL39P62891 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RPL39P62891 SNORA68.2-201ENST00000391263 128 ntBASIC2.51□□□□□ -2.01
RPL39P62891 OR6C69P-201ENST00000394268 893 ntBASIC2.51□□□□□ -2.01
RPL39P62891 AL133270.1-201ENST00000402635 279 ntBASIC2.51□□□□□ -2.01
RPL39P62891 U3.39-201ENST00000408569 239 ntBASIC2.51□□□□□ -2.01
RPL39P62891 EIF4A1P3-201ENST00000411521 244 ntBASIC2.51□□□□□ -2.01
RPL39P62891 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.51□□□□□ -2.01
RPL39P62891 RPS7P13-201ENST00000413955 498 ntBASIC2.51□□□□□ -2.01
RPL39P62891 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC2.51□□□□□ -2.01
RPL39P62891 AL513174.1-201ENST00000423182 629 ntBASIC2.51□□□□□ -2.01
RPL39P62891 GLRXP1-201ENST00000423261 334 ntBASIC2.51□□□□□ -2.01
RPL39P62891 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RPL39P62891 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.51□□□□□ -2.01
RPL39P62891 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.51□□□□□ -2.01
RPL39P62891 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.51□□□□□ -2.01
RPL39P62891 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC2.51□□□□□ -2.01
RPL39P62891 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.51□□□□□ -2.01
RPL39P62891 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.51□□□□□ -2.01
RPL39P62891 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.51□□□□□ -2.01
RPL39P62891 AP000563.1-201ENST00000490865 758 ntBASIC2.51□□□□□ -2.01
RPL39P62891 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.51□□□□□ -2.01
RPL39P62891 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC2.51□□□□□ -2.01
RPL39P62891 SNORA31.9-201ENST00000516429 84 ntBASIC2.51□□□□□ -2.01
RPL39P62891 SCARNA14-201ENST00000516903 136 ntBASIC2.51□□□□□ -2.01
RPL39P62891 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.51□□□□□ -2.01
RPL39P62891 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.51□□□□□ -2.01
RPL39P62891 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC2.51□□□□□ -2.01
RPL39P62891 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.51□□□□□ -2.01
RPL39P62891 AC026333.2-201ENST00000542164 106 ntBASIC2.51□□□□□ -2.01
RPL39P62891 AC135001.1-201ENST00000544546 283 ntBASIC2.51□□□□□ -2.01
RPL39P62891 DUXAP6-201ENST00000553858 601 ntBASIC2.51□□□□□ -2.01
RPL39P62891 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.51□□□□□ -2.01
RPL39P62891 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC2.51□□□□□ -2.01
RPL39P62891 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.51□□□□□ -2.01
RPL39P62891 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RPL39P62891 SETP3-201ENST00000581726 813 ntBASIC2.51□□□□□ -2.01
RPL39P62891 AC008507.1-201ENST00000587506 734 ntBASIC2.51□□□□□ -2.01
RPL39P62891 MIR6867-201ENST00000610636 67 ntBASIC2.51□□□□□ -2.01
RPL39P62891 AC090506.2-201ENST00000624521 419 ntBASIC2.51□□□□□ -2.01
RPL39P62891 AC106871.1-201ENST00000568324 3102 ntBASIC2.51□□□□□ -2.01
RPL39P62891 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RPL39P62891 AC024560.2-201ENST00000507981 1497 ntBASIC2.51□□□□□ -2.01
RPL39P62891 AC012618.3-205ENST00000637896 1496 ntBASIC2.51□□□□□ -2.01
RPL39P62891 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
RPL39P62891 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPL39P62891 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.5□□□□□ -2.01
RPL39P62891 AC004972.1-201ENST00000623934 2209 ntBASIC2.5□□□□□ -2.01
RPL39P62891 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.5□□□□□ -2.01
RPL39P62891 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPL39P62891 RNU1-75P-201ENST00000347264 129 ntBASIC2.5□□□□□ -2.01
RPL39P62891 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC2.5□□□□□ -2.01
RPL39P62891 AL356095.1-201ENST00000417217 199 ntBASIC2.5□□□□□ -2.01
RPL39P62891 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC2.5□□□□□ -2.01
RPL39P62891 FAR1P1-201ENST00000427163 934 ntBASIC2.5□□□□□ -2.01
RPL39P62891 AC068287.1-201ENST00000430283 295 ntBASIC2.5□□□□□ -2.01
RPL39P62891 AL357552.1-201ENST00000445254 415 ntBASIC2.5□□□□□ -2.01
RPL39P62891 EIF2S2P2-201ENST00000447161 982 ntBASIC2.5□□□□□ -2.01
RPL39P62891 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.5□□□□□ -2.01
RPL39P62891 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.5□□□□□ -2.01
RPL39P62891 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC2.5□□□□□ -2.01
RPL39P62891 RPL12P26-201ENST00000452430 487 ntBASIC2.5□□□□□ -2.01
RPL39P62891 UBDP1-202ENST00000457888 382 ntBASIC2.5□□□□□ -2.01
RPL39P62891 AC008410.1-201ENST00000483777 339 ntBASIC2.5□□□□□ -2.01
RPL39P62891 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC2.5□□□□□ -2.01
RPL39P62891 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.5□□□□□ -2.01
RPL39P62891 RNU6-579P-201ENST00000516879 102 ntBASIC2.5□□□□□ -2.01
RPL39P62891 MIR2276-201ENST00000516886 89 ntBASIC2.5□□□□□ -2.01
RPL39P62891 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC2.5□□□□□ -2.01
RPL39P62891 MRPL49P2-201ENST00000521066 465 ntBASIC2.5□□□□□ -2.01
RPL39P62891 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RPL39P62891 PDCL2P2-201ENST00000533651 189 ntBASIC2.5□□□□□ -2.01
RPL39P62891 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.5□□□□□ -2.01
RPL39P62891 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPL39P62891 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC2.5□□□□□ -2.01
RPL39P62891 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RPL39P62891 RN7SL753P-201ENST00000581238 290 ntBASIC2.5□□□□□ -2.01
RPL39P62891 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.5□□□□□ -2.01
RPL39P62891 ELOCP28-201ENST00000590044 317 ntBASIC2.5□□□□□ -2.01
RPL39P62891 AC011492.1-201ENST00000600023 315 ntBASIC2.5□□□□□ -2.01
RPL39P62891 AC234771.5-201ENST00000600161 514 ntBASIC2.5□□□□□ -2.01
RPL39P62891 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPL39P62891 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPL39P62891 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms