Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.56□□□□□ -1.84
ACTBP60709 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.56□□□□□ -1.84
ACTBP60709 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.56□□□□□ -1.84
ACTBP60709 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
ACTBP60709 AC084783.1-201ENST00000565846 910 ntBASIC3.56□□□□□ -1.84
ACTBP60709 AC007599.1-201ENST00000568688 1174 ntBASIC3.56□□□□□ -1.84
ACTBP60709 AC006270.2-201ENST00000578523 652 ntBASIC3.56□□□□□ -1.84
ACTBP60709 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.56□□□□□ -1.84
ACTBP60709 AP001160.4-201ENST00000596971 382 ntBASIC3.56□□□□□ -1.84
ACTBP60709 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.56□□□□□ -1.84
ACTBP60709 AP003117.2-201ENST00000606010 545 ntBASIC3.56□□□□□ -1.84
ACTBP60709 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ACTBP60709 AL133370.2-201ENST00000619934 439 ntBASIC3.56□□□□□ -1.84
ACTBP60709 AC002044.3-201ENST00000623314 541 ntBASIC3.56□□□□□ -1.84
ACTBP60709 AC116563.2-201ENST00000624751 535 ntBASIC3.56□□□□□ -1.84
ACTBP60709 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.56□□□□□ -1.84
ACTBP60709 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
ACTBP60709 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ACTBP60709 OR56B2P-202ENST00000641377 2453 ntBASIC3.56□□□□□ -1.84
ACTBP60709 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
ACTBP60709 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ACTBP60709 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.56□□□□□ -1.84
ACTBP60709 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.56□□□□□ -1.84
ACTBP60709 Z82217.1-201ENST00000625157 8149 ntBASIC3.56□□□□□ -1.84
ACTBP60709 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ACTBP60709 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ACTBP60709 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ACTBP60709 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ACTBP60709 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ACTBP60709 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTBP60709 RNU6-1251P-201ENST00000364502 107 ntBASIC3.55□□□□□ -1.84
ACTBP60709 RNA5SP505-201ENST00000364748 108 ntBASIC3.55□□□□□ -1.84
ACTBP60709 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
ACTBP60709 RNU6-398P-201ENST00000384143 109 ntBASIC3.55□□□□□ -1.84
ACTBP60709 SNORA37-201ENST00000384504 129 ntBASIC3.55□□□□□ -1.84
ACTBP60709 MIR192-201ENST00000384915 110 ntBASIC3.55□□□□□ -1.84
ACTBP60709 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
ACTBP60709 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
ACTBP60709 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.55□□□□□ -1.84
ACTBP60709 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ACTBP60709 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTBP60709 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
ACTBP60709 AL138878.2-201ENST00000440581 1241 ntBASIC3.55□□□□□ -1.84
ACTBP60709 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTBP60709 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTBP60709 CFTRP1-201ENST00000456646 183 ntBASIC3.55□□□□□ -1.84
ACTBP60709 MTND2P28-201ENST00000457540 1044 ntBASIC3.55□□□□□ -1.84
ACTBP60709 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTBP60709 AL049830.2-201ENST00000480072 201 ntBASIC3.55□□□□□ -1.84
ACTBP60709 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.55□□□□□ -1.84
ACTBP60709 RPL5P23-201ENST00000496040 868 ntBASIC3.55□□□□□ -1.84
ACTBP60709 AK3P4-201ENST00000504283 583 ntBASIC3.55□□□□□ -1.84
ACTBP60709 HPRT1P2-201ENST00000505250 544 ntBASIC3.55□□□□□ -1.84
ACTBP60709 AC093720.1-201ENST00000505681 714 ntBASIC3.55□□□□□ -1.84
ACTBP60709 AC002456.2-201ENST00000509356 380 ntBASIC3.55□□□□□ -1.84
ACTBP60709 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTBP60709 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTBP60709 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTBP60709 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTBP60709 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.55□□□□□ -1.84
ACTBP60709 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTBP60709 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTBP60709 AC137768.1-201ENST00000549998 553 ntBASIC3.55□□□□□ -1.84
ACTBP60709 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.55□□□□□ -1.84
ACTBP60709 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTBP60709 ZNF192P1-203ENST00000565888 810 ntBASIC3.55□□□□□ -1.84
ACTBP60709 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.55□□□□□ -1.84
ACTBP60709 AC115286.1-201ENST00000604298 434 ntBASIC3.55□□□□□ -1.84
ACTBP60709 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.55□□□□□ -1.84
ACTBP60709 AC105429.2-201ENST00000610567 517 ntBASIC3.55□□□□□ -1.84
ACTBP60709 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.55□□□□□ -1.84
ACTBP60709 AC095038.2-201ENST00000621464 1070 ntBASIC3.55□□□□□ -1.84
ACTBP60709 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ACTBP60709 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
ACTBP60709 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
ACTBP60709 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ACTBP60709 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
ACTBP60709 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.54□□□□□ -1.84
ACTBP60709 AP001148.1-201ENST00000624124 2359 ntBASIC3.54□□□□□ -1.84
ACTBP60709 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.54□□□□□ -1.84
ACTBP60709 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ACTBP60709 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ACTBP60709 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ACTBP60709 MIR129-1-201ENST00000384972 72 ntBASIC3.54□□□□□ -1.84
ACTBP60709 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ACTBP60709 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.54□□□□□ -1.84
ACTBP60709 AC115285.1-201ENST00000424879 736 ntBASIC3.54□□□□□ -1.84
ACTBP60709 RPEP3-201ENST00000425462 676 ntBASIC3.54□□□□□ -1.84
ACTBP60709 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.54□□□□□ -1.84
ACTBP60709 AC011998.1-201ENST00000433403 117 ntBASIC3.54□□□□□ -1.84
ACTBP60709 AL512326.1-201ENST00000443050 721 ntBASIC3.54□□□□□ -1.84
ACTBP60709 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.54□□□□□ -1.84
ACTBP60709 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.54□□□□□ -1.84
ACTBP60709 OR6C72P-201ENST00000451403 892 ntBASIC3.54□□□□□ -1.84
ACTBP60709 DHFRP3-201ENST00000455595 559 ntBASIC3.54□□□□□ -1.84
ACTBP60709 AC010307.1-201ENST00000467206 836 ntBASIC3.54□□□□□ -1.84
ACTBP60709 RPL7L1P8-201ENST00000469911 741 ntBASIC3.54□□□□□ -1.84
ACTBP60709 RPS29P22-201ENST00000472363 168 ntBASIC3.54□□□□□ -1.84
ACTBP60709 STRADBP1-201ENST00000478954 1281 ntBASIC3.54□□□□□ -1.84
ACTBP60709 AC078817.1-201ENST00000492623 435 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms