Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CDH13P55290 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH13P55290 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH13P55290 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CDH13P55290 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CDH13P55290 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CDH13P55290 KARSP3-201ENST00000571212 1504 ntBASIC4.41□□□□□ -1.7
CDH13P55290 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH13P55290 AC139769.1-204ENST00000472297 1931 ntBASIC4.41□□□□□ -1.7
CDH13P55290 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CDH13P55290 HNRNPDP2-201ENST00000406475 478 ntBASIC4.41□□□□□ -1.7
CDH13P55290 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH13P55290 AL160275.2-201ENST00000412010 394 ntBASIC4.41□□□□□ -1.7
CDH13P55290 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH13P55290 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH13P55290 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH13P55290 SAGE2P-201ENST00000420011 2126 ntBASIC4.41□□□□□ -1.7
CDH13P55290 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH13P55290 RPL23AP25-201ENST00000430973 463 ntBASIC4.41□□□□□ -1.7
CDH13P55290 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.41□□□□□ -1.7
CDH13P55290 MTCYBP15-201ENST00000433123 1127 ntBASIC4.41□□□□□ -1.7
CDH13P55290 AC023347.2-201ENST00000433994 462 ntBASIC4.41□□□□□ -1.7
CDH13P55290 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH13P55290 MTND6P18-201ENST00000439477 513 ntBASIC4.41□□□□□ -1.7
CDH13P55290 PTGES3P1-201ENST00000439531 483 ntBASIC4.41□□□□□ -1.7
CDH13P55290 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH13P55290 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDH13P55290 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH13P55290 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH13P55290 RPL6P9-201ENST00000466502 859 ntBASIC4.41□□□□□ -1.7
CDH13P55290 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH13P55290 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH13P55290 PRELID3BP6-201ENST00000503839 571 ntBASIC4.41□□□□□ -1.7
CDH13P55290 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH13P55290 AC091860.1-201ENST00000505723 432 ntBASIC4.41□□□□□ -1.7
CDH13P55290 AC113430.1-201ENST00000506872 718 ntBASIC4.41□□□□□ -1.7
CDH13P55290 AC008837.1-201ENST00000511513 412 ntBASIC4.41□□□□□ -1.7
CDH13P55290 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH13P55290 RNU6-416P-201ENST00000516265 103 ntBASIC4.41□□□□□ -1.7
CDH13P55290 AC090151.1-201ENST00000520784 730 ntBASIC4.41□□□□□ -1.7
CDH13P55290 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.41□□□□□ -1.7
CDH13P55290 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH13P55290 AC087897.1-201ENST00000550134 156 ntBASIC4.41□□□□□ -1.7
CDH13P55290 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH13P55290 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH13P55290 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH13P55290 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH13P55290 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.41□□□□□ -1.7
CDH13P55290 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH13P55290 AC069431.2-201ENST00000604149 1099 ntBASIC4.41□□□□□ -1.7
CDH13P55290 AC010201.1-201ENST00000605051 540 ntBASIC4.41□□□□□ -1.7
CDH13P55290 AP000240.1-201ENST00000609910 452 ntBASIC4.41□□□□□ -1.7
CDH13P55290 AC016597.2-201ENST00000613256 341 ntBASIC4.41□□□□□ -1.7
CDH13P55290 VN1R74P-201ENST00000613259 503 ntBASIC4.41□□□□□ -1.7
CDH13P55290 AC068870.2-201ENST00000620635 389 ntBASIC4.41□□□□□ -1.7
CDH13P55290 AP003485.1-201ENST00000625093 753 ntBASIC4.41□□□□□ -1.7
CDH13P55290 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH13P55290 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH13P55290 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.41□□□□□ -1.7
CDH13P55290 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH13P55290 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH13P55290 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CDH13P55290 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH13P55290 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.4□□□□□ -1.7
CDH13P55290 ZNF137P-201ENST00000456718 1920 ntBASIC4.4□□□□□ -1.7
CDH13P55290 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.4□□□□□ -1.7
CDH13P55290 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.4□□□□□ -1.7
CDH13P55290 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.4□□□□□ -1.7
CDH13P55290 ANKRD36P1-201ENST00000344424 659 ntBASIC4.4□□□□□ -1.71
CDH13P55290 RNU1-87P-201ENST00000363727 170 ntBASIC4.4□□□□□ -1.71
CDH13P55290 RNU1-44P-201ENST00000384453 163 ntBASIC4.4□□□□□ -1.71
CDH13P55290 AL121834.1-202ENST00000404494 277 ntBASIC4.4□□□□□ -1.71
CDH13P55290 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH13P55290 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH13P55290 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH13P55290 RAD23BP1-201ENST00000421404 1227 ntBASIC4.4□□□□□ -1.71
CDH13P55290 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH13P55290 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH13P55290 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH13P55290 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.4□□□□□ -1.71
CDH13P55290 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH13P55290 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH13P55290 MTND4LP2-201ENST00000502312 285 ntBASIC4.4□□□□□ -1.71
CDH13P55290 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDH13P55290 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH13P55290 IGLV3-26-201ENST00000520756 302 ntBASIC4.4□□□□□ -1.71
CDH13P55290 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH13P55290 AC100770.1-201ENST00000532310 322 ntBASIC4.4□□□□□ -1.71
CDH13P55290 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.4□□□□□ -1.71
CDH13P55290 AC063949.1-201ENST00000552900 865 ntBASIC4.4□□□□□ -1.71
CDH13P55290 AC068446.3-201ENST00000555285 382 ntBASIC4.4□□□□□ -1.71
CDH13P55290 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH13P55290 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH13P55290 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH13P55290 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH13P55290 MIR4646-201ENST00000580775 63 ntBASIC4.4□□□□□ -1.71
CDH13P55290 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH13P55290 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH13P55290 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH13P55290 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms