Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH4P55283 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CDH4P55283 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH4P55283 SNORA60-201ENST00000362396 134 ntBASIC4.22□□□□□ -1.73
CDH4P55283 RNA5SP513-201ENST00000364648 118 ntBASIC4.22□□□□□ -1.73
CDH4P55283 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH4P55283 RPL31P52-201ENST00000407532 367 ntBASIC4.22□□□□□ -1.73
CDH4P55283 AC013404.1-201ENST00000413068 249 ntBASIC4.22□□□□□ -1.73
CDH4P55283 TPT1P2-201ENST00000413105 503 ntBASIC4.22□□□□□ -1.73
CDH4P55283 AL450992.3-201ENST00000413192 568 ntBASIC4.22□□□□□ -1.73
CDH4P55283 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH4P55283 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH4P55283 DYNLL1P7-201ENST00000429273 258 ntBASIC4.22□□□□□ -1.73
CDH4P55283 AC069285.2-201ENST00000440210 275 ntBASIC4.22□□□□□ -1.73
CDH4P55283 HSFY6P-201ENST00000445573 403 ntBASIC4.22□□□□□ -1.73
CDH4P55283 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH4P55283 RPL5P32-201ENST00000454085 879 ntBASIC4.22□□□□□ -1.73
CDH4P55283 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH4P55283 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH4P55283 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH4P55283 RPL29P14-201ENST00000495837 428 ntBASIC4.22□□□□□ -1.73
CDH4P55283 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH4P55283 AC006499.6-201ENST00000511169 607 ntBASIC4.22□□□□□ -1.73
CDH4P55283 AC108120.2-201ENST00000512973 294 ntBASIC4.22□□□□□ -1.73
CDH4P55283 AC018797.3-201ENST00000513388 1241 ntBASIC4.22□□□□□ -1.73
CDH4P55283 RN7SKP21-201ENST00000516503 220 ntBASIC4.22□□□□□ -1.73
CDH4P55283 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CDH4P55283 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.22□□□□□ -1.73
CDH4P55283 AC084757.1-201ENST00000559987 490 ntBASIC4.22□□□□□ -1.73
CDH4P55283 AC023158.1-201ENST00000561632 1025 ntBASIC4.22□□□□□ -1.73
CDH4P55283 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH4P55283 CYP4A43P-201ENST00000568156 121 ntBASIC4.22□□□□□ -1.73
CDH4P55283 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH4P55283 MTND6P33-201ENST00000571794 183 ntBASIC4.22□□□□□ -1.73
CDH4P55283 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH4P55283 AC007423.1-201ENST00000605009 627 ntBASIC4.22□□□□□ -1.73
CDH4P55283 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH4P55283 AL031666.3-201ENST00000609320 1006 ntBASIC4.22□□□□□ -1.73
CDH4P55283 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH4P55283 AC055764.2-201ENST00000610089 670 ntBASIC4.22□□□□□ -1.73
CDH4P55283 AC011472.4-201ENST00000615848 491 ntBASIC4.22□□□□□ -1.73
CDH4P55283 AC068724.3-201ENST00000625906 87 ntBASIC4.22□□□□□ -1.73
CDH4P55283 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH4P55283 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDH4P55283 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH4P55283 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH4P55283 AC134882.1-201ENST00000603738 1676 ntBASIC4.22□□□□□ -1.73
CDH4P55283 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH4P55283 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH4P55283 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CDH4P55283 OR11H5P-202ENST00000641612 1325 ntBASIC4.21□□□□□ -1.73
CDH4P55283 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CDH4P55283 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.21□□□□□ -1.73
CDH4P55283 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.21□□□□□ -1.73
CDH4P55283 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CDH4P55283 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
CDH4P55283 MTCO1P8-201ENST00000416914 1523 ntBASIC4.21□□□□□ -1.73
CDH4P55283 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CDH4P55283 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
CDH4P55283 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CDH4P55283 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CDH4P55283 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH4P55283 AP000357.1-201ENST00000409926 1165 ntBASIC4.21□□□□□ -1.74
CDH4P55283 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH4P55283 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH4P55283 EIF4EP1-201ENST00000422311 642 ntBASIC4.21□□□□□ -1.74
CDH4P55283 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH4P55283 OR4C10P-201ENST00000434991 931 ntBASIC4.21□□□□□ -1.74
CDH4P55283 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH4P55283 HLA-N-201ENST00000437516 135 ntBASIC4.21□□□□□ -1.74
CDH4P55283 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.21□□□□□ -1.74
CDH4P55283 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH4P55283 AC006511.1-201ENST00000470614 315 ntBASIC4.21□□□□□ -1.74
CDH4P55283 AC011037.1-201ENST00000483964 558 ntBASIC4.21□□□□□ -1.74
CDH4P55283 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.21□□□□□ -1.74
CDH4P55283 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH4P55283 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH4P55283 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH4P55283 HNRNPCP4-201ENST00000571636 900 ntBASIC4.21□□□□□ -1.74
CDH4P55283 MIR5684-201ENST00000585074 65 ntBASIC4.21□□□□□ -1.74
CDH4P55283 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH4P55283 AL139286.1-201ENST00000604465 483 ntBASIC4.21□□□□□ -1.74
CDH4P55283 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH4P55283 RMST_9.1-201ENST00000619945 193 ntBASIC4.21□□□□□ -1.74
CDH4P55283 AC068831.8-201ENST00000620171 435 ntBASIC4.21□□□□□ -1.74
CDH4P55283 AC007342.8-201ENST00000623278 678 ntBASIC4.21□□□□□ -1.74
CDH4P55283 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH4P55283 CFTRP2-201ENST00000634304 199 ntBASIC4.21□□□□□ -1.74
CDH4P55283 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH4P55283 Z73965.1-201ENST00000623412 2297 ntBASIC4.21□□□□□ -1.74
CDH4P55283 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH4P55283 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH4P55283 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH4P55283 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CDH4P55283 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CDH4P55283 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH4P55283 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH4P55283 SPRR2C-201ENST00000290702 219 ntBASIC4.2□□□□□ -1.74
CDH4P55283 RNU1-108P-201ENST00000362556 161 ntBASIC4.2□□□□□ -1.74
CDH4P55283 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms