Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ELL2P4-201ENST00000446870 1376 ntBASIC5.23□□□□□ -1.57
NEK3P51956 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NEK3P51956 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NEK3P51956 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NEK3P51956 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
NEK3P51956 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NEK3P51956 MAPK10-349ENST00000641767 3661 ntBASIC5.23□□□□□ -1.57
NEK3P51956 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.23□□□□□ -1.57
NEK3P51956 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.23□□□□□ -1.57
NEK3P51956 AC009951.1-201ENST00000623674 2614 ntBASIC5.23□□□□□ -1.57
NEK3P51956 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NEK3P51956 AP001273.1-201ENST00000624493 3152 ntBASIC5.22□□□□□ -1.57
NEK3P51956 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NEK3P51956 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NEK3P51956 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEK3P51956 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEK3P51956 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.22□□□□□ -1.57
NEK3P51956 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEK3P51956 PCAT14-202ENST00000627127 3935 ntBASIC5.22□□□□□ -1.57
NEK3P51956 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.22□□□□□ -1.57
NEK3P51956 SNURFL-201ENST00000309296 343 ntBASIC5.22□□□□□ -1.57
NEK3P51956 OR4A15-201ENST00000314706 1035 ntBASIC5.22□□□□□ -1.57
NEK3P51956 RNU1-85P-201ENST00000364127 164 ntBASIC5.22□□□□□ -1.57
NEK3P51956 RNU4-4P-201ENST00000364588 130 ntBASIC5.22□□□□□ -1.57
NEK3P51956 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEK3P51956 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.22□□□□□ -1.57
NEK3P51956 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NEK3P51956 RN7SKP125-201ENST00000410481 302 ntBASIC5.22□□□□□ -1.57
NEK3P51956 AL136133.1-201ENST00000413694 376 ntBASIC5.22□□□□□ -1.57
NEK3P51956 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.22□□□□□ -1.57
NEK3P51956 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.22□□□□□ -1.57
NEK3P51956 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NEK3P51956 DDX39BP1-205ENST00000422507 192 ntBASIC5.22□□□□□ -1.57
NEK3P51956 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.22□□□□□ -1.57
NEK3P51956 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.22□□□□□ -1.57
NEK3P51956 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.22□□□□□ -1.57
NEK3P51956 RPL36P19-201ENST00000430744 301 ntBASIC5.22□□□□□ -1.57
NEK3P51956 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.22□□□□□ -1.57
NEK3P51956 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.22□□□□□ -1.57
NEK3P51956 RPL35AP21-201ENST00000437667 333 ntBASIC5.22□□□□□ -1.57
NEK3P51956 RPL23AP76-201ENST00000441860 458 ntBASIC5.22□□□□□ -1.57
NEK3P51956 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.22□□□□□ -1.57
NEK3P51956 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.22□□□□□ -1.57
NEK3P51956 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.22□□□□□ -1.57
NEK3P51956 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.22□□□□□ -1.57
NEK3P51956 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.22□□□□□ -1.57
NEK3P51956 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.22□□□□□ -1.57
NEK3P51956 RN7SL591P-201ENST00000496150 292 ntBASIC5.22□□□□□ -1.57
NEK3P51956 RNF138P1-201ENST00000502765 546 ntBASIC5.22□□□□□ -1.57
NEK3P51956 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.22□□□□□ -1.57
NEK3P51956 WBP1LP4-201ENST00000505043 344 ntBASIC5.22□□□□□ -1.57
NEK3P51956 AC073358.1-201ENST00000505671 684 ntBASIC5.22□□□□□ -1.57
NEK3P51956 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEK3P51956 AC109445.1-201ENST00000512356 383 ntBASIC5.22□□□□□ -1.57
NEK3P51956 AC004980.4-201ENST00000513375 203 ntBASIC5.22□□□□□ -1.57
NEK3P51956 RNU5A-4P-201ENST00000516588 111 ntBASIC5.22□□□□□ -1.57
NEK3P51956 RN7SKP260-201ENST00000516907 149 ntBASIC5.22□□□□□ -1.57
NEK3P51956 RN7SKP147-201ENST00000517154 244 ntBASIC5.22□□□□□ -1.57
NEK3P51956 AP000790.1-201ENST00000528891 737 ntBASIC5.22□□□□□ -1.57
NEK3P51956 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NEK3P51956 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
NEK3P51956 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.22□□□□□ -1.57
NEK3P51956 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.22□□□□□ -1.57
NEK3P51956 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.22□□□□□ -1.57
NEK3P51956 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.22□□□□□ -1.57
NEK3P51956 SULT1C2P1-202ENST00000562418 459 ntBASIC5.22□□□□□ -1.57
NEK3P51956 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NEK3P51956 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.22□□□□□ -1.57
NEK3P51956 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.22□□□□□ -1.57
NEK3P51956 AC008536.1-201ENST00000602872 669 ntBASIC5.22□□□□□ -1.57
NEK3P51956 AC107952.2-201ENST00000606048 486 ntBASIC5.22□□□□□ -1.57
NEK3P51956 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.22□□□□□ -1.57
NEK3P51956 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
NEK3P51956 THAP12P4-201ENST00000528321 2266 ntBASIC5.22□□□□□ -1.57
NEK3P51956 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
NEK3P51956 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.22□□□□□ -1.57
NEK3P51956 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEK3P51956 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEK3P51956 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NEK3P51956 AC117529.2-201ENST00000512159 2068 ntBASIC5.22□□□□□ -1.57
NEK3P51956 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.22□□□□□ -1.57
NEK3P51956 AC008079.2-201ENST00000623543 20396 ntBASIC5.22□□□□□ -1.57
NEK3P51956 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEK3P51956 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.22□□□□□ -1.57
NEK3P51956 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
NEK3P51956 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
NEK3P51956 AC131971.1-201ENST00000332881 1482 ntBASIC5.21□□□□□ -1.58
NEK3P51956 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NEK3P51956 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
NEK3P51956 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
NEK3P51956 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NEK3P51956 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NEK3P51956 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.21□□□□□ -1.58
NEK3P51956 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NEK3P51956 TAS2R15P-201ENST00000390674 928 ntBASIC5.21□□□□□ -1.58
NEK3P51956 BTBD10P2-201ENST00000404779 676 ntBASIC5.21□□□□□ -1.58
NEK3P51956 RPL23AP47-201ENST00000408017 460 ntBASIC5.21□□□□□ -1.58
NEK3P51956 RPS15AP40-201ENST00000419621 391 ntBASIC5.21□□□□□ -1.58
NEK3P51956 COX6CP15-201ENST00000426313 211 ntBASIC5.21□□□□□ -1.58
NEK3P51956 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms