Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC104651.2-201ENST00000447549 528 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 RHEBP2-201ENST00000450289 600 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.58□□□□□ -1.68
CLCNKAP51800 CEACAMP6-201ENST00000452007 574 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCNKAP51800 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCNKAP51800 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCNKAP51800 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CLCNKAP51800 RPL21P131-201ENST00000497298 483 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 MTND4LP2-201ENST00000502312 285 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCNKAP51800 AC139103.1-201ENST00000534696 1030 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCNKAP51800 AC090888.2-201ENST00000559765 1144 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 AC090515.3-201ENST00000560431 315 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCNKAP51800 MIR4716-201ENST00000579628 84 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLCNKAP51800 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCNKAP51800 AC022022.2-201ENST00000602989 360 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLCNKAP51800 MIR6748-201ENST00000610433 71 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 AP000676.4-201ENST00000624659 623 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 OR56B2P-202ENST00000641377 2453 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCNKAP51800 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLCNKAP51800 AL592182.3-201ENST00000642132 3304 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLCNKAP51800 OR51H2P-202ENST00000641424 3046 ntBASIC4.58□□□□□ -1.68
CLCNKAP51800 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCNKAP51800 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLCNKAP51800 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.58□□□□□ -1.68
CLCNKAP51800 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLCNKAP51800 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLCNKAP51800 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCNKAP51800 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
CLCNKAP51800 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCNKAP51800 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.57□□□□□ -1.68
CLCNKAP51800 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CLCNKAP51800 AC093311.1-201ENST00000506586 2021 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 NEAT1-202ENST00000501122 22743 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCNKAP51800 ENSAP3-201ENST00000312710 333 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLCNKAP51800 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 RNU6-236P-201ENST00000363886 106 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CLCNKAP51800 RNU6-98P-201ENST00000384173 107 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
CLCNKAP51800 FAR2P2-201ENST00000413041 594 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCNKAP51800 TAF13P2-201ENST00000416876 286 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCNKAP51800 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCNKAP51800 AC069213.2-201ENST00000420238 366 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCNKAP51800 AC009965.2-201ENST00000425328 970 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 FAR2P4-202ENST00000425399 584 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 RPL7P29-201ENST00000437151 728 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 AC092170.1-201ENST00000440211 356 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCNKAP51800 GEMIN8P3-201ENST00000445417 720 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 AL050341.1-201ENST00000447743 313 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCNKAP51800 AC239809.1-201ENST00000450470 217 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCNKAP51800 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.57□□□□□ -1.68
CLCNKAP51800 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCNKAP51800 RPL7P32-201ENST00000457119 744 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 RNU7-140P-201ENST00000459546 60 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.57□□□□□ -1.68
CLCNKAP51800 AC104687.1-201ENST00000485829 412 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 AC020890.1-201ENST00000491837 504 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 PRELID3BP5-201ENST00000508612 460 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 AC007016.1-201ENST00000512110 244 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCNKAP51800 RNU6-347P-201ENST00000516658 105 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 RN7SKP92-201ENST00000517266 244 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 AC022882.1-201ENST00000532142 501 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCNKAP51800 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.57□□□□□ -1.68
CLCNKAP51800 AC022884.3-201ENST00000579571 248 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCNKAP51800 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.57□□□□□ -1.68
CLCNKAP51800 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCNKAP51800 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCNKAP51800 AC009464.1-201ENST00000615731 469 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 U3.53-201ENST00000628922 216 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCNKAP51800 U6.107-201ENST00000637108 79 ntBASIC4.57□□□□□ -1.68
CLCNKAP51800 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCNKAP51800 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCNKAP51800 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCNKAP51800 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCNKAP51800 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLCNKAP51800 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLCNKAP51800 AL592148.3-201ENST00000608771 2646 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms