Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC093673.2-201ENST00000609674 331 ntBASIC3.82□□□□□ -1.8
HCFC1P51610 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.82□□□□□ -1.8
HCFC1P51610 AC093875.1-201ENST00000623688 504 ntBASIC3.82□□□□□ -1.8
HCFC1P51610 CDRT1-208ENST00000630868 794 ntBASIC3.82□□□□□ -1.8
HCFC1P51610 AC008993.2-201ENST00000631744 806 ntBASIC3.82□□□□□ -1.8
HCFC1P51610 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.81□□□□□ -1.8
HCFC1P51610 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.81□□□□□ -1.8
HCFC1P51610 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC1P51610 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC1P51610 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC1P51610 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HCFC1P51610 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC1P51610 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC1P51610 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC3.81□□□□□ -1.8
HCFC1P51610 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC1P51610 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.81□□□□□ -1.8
HCFC1P51610 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC1P51610 RNU1-83P-201ENST00000363426 164 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 RNA5SP387-201ENST00000364226 106 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.81□□□□□ -1.8
HCFC1P51610 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HCFC1P51610 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC1P51610 RNU6-796P-201ENST00000391086 107 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.81□□□□□ -1.8
HCFC1P51610 PTP4A1P7-201ENST00000423476 514 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 HMGB3P5-201ENST00000428894 612 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.81□□□□□ -1.8
HCFC1P51610 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.81□□□□□ -1.8
HCFC1P51610 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.81□□□□□ -1.8
HCFC1P51610 AL935212.3-201ENST00000450729 284 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 GTF2IP12-201ENST00000456547 356 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 RPS20P4-201ENST00000461659 355 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 AC079804.1-201ENST00000461922 436 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.81□□□□□ -1.8
HCFC1P51610 KCTD9P2-201ENST00000512203 1013 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 AC108120.2-201ENST00000512973 294 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.81□□□□□ -1.8
HCFC1P51610 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.81□□□□□ -1.8
HCFC1P51610 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.81□□□□□ -1.8
HCFC1P51610 AC022882.1-201ENST00000532142 501 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 OR8R1P-201ENST00000543943 764 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.81□□□□□ -1.8
HCFC1P51610 AC087499.8-201ENST00000578406 226 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 MIR3158-1-201ENST00000583596 81 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HCFC1P51610 AC097655.1-201ENST00000635075 318 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 AC008013.2-202ENST00000637965 364 ntBASIC3.81□□□□□ -1.8
HCFC1P51610 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC1P51610 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC1P51610 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
HCFC1P51610 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC1P51610 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.81□□□□□ -1.8
HCFC1P51610 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC1P51610 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HCFC1P51610 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC1P51610 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HCFC1P51610 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.8□□□□□ -1.8
HCFC1P51610 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HCFC1P51610 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
HCFC1P51610 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
HCFC1P51610 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.8□□□□□ -1.8
HCFC1P51610 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.8□□□□□ -1.8
HCFC1P51610 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HCFC1P51610 RNA5SP307-201ENST00000362863 116 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
HCFC1P51610 MIR195-201ENST00000385194 87 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HCFC1P51610 RNU6-584P-201ENST00000410350 95 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.8□□□□□ -1.8
HCFC1P51610 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.8□□□□□ -1.8
HCFC1P51610 AC062016.2-201ENST00000420950 676 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 AC069157.1-201ENST00000421749 137 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.8□□□□□ -1.8
HCFC1P51610 NMNAT1P2-201ENST00000435192 860 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 AC092691.2-201ENST00000461787 803 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 AC098862.1-201ENST00000504991 413 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.8□□□□□ -1.8
HCFC1P51610 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.8□□□□□ -1.8
HCFC1P51610 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
HCFC1P51610 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HCFC1P51610 AC099522.1-202ENST00000514718 367 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 MTND4LP31-201ENST00000514859 294 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 AC087888.1-201ENST00000550884 1254 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 AC084759.1-201ENST00000561168 290 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 AC053481.3-201ENST00000577881 843 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.8□□□□□ -1.8
HCFC1P51610 AP002906.1-201ENST00000603405 233 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 COX6CP4-201ENST00000605798 228 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 RNU4-89P-201ENST00000607443 133 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.8□□□□□ -1.8
HCFC1P51610 AL353600.1-201ENST00000608148 251 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 VN1R9P-201ENST00000614184 867 ntBASIC3.8□□□□□ -1.8
HCFC1P51610 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
HCFC1P51610 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
HCFC1P51610 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.8□□□□□ -1.8
HCFC1P51610 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HCFC1P51610 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HCFC1P51610 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
HCFC1P51610 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HCFC1P51610 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms