Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 PCNPP1-201ENST00000552501 511 ntBASIC3.99□□□□□ -1.77
CDX1P47902 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.99□□□□□ -1.77
CDX1P47902 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.99□□□□□ -1.77
CDX1P47902 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.99□□□□□ -1.77
CDX1P47902 OR1F2P-201ENST00000570470 933 ntBASIC3.99□□□□□ -1.77
CDX1P47902 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.99□□□□□ -1.77
CDX1P47902 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
CDX1P47902 AP005137.2-201ENST00000609238 400 ntBASIC3.99□□□□□ -1.77
CDX1P47902 AC105227.2-201ENST00000615075 605 ntBASIC3.99□□□□□ -1.77
CDX1P47902 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.99□□□□□ -1.77
CDX1P47902 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.99□□□□□ -1.77
CDX1P47902 AC005086.4-201ENST00000623065 213 ntBASIC3.99□□□□□ -1.77
CDX1P47902 AC124312.6-202ENST00000623624 418 ntBASIC3.99□□□□□ -1.77
CDX1P47902 FAM157B-203ENST00000639350 358 ntBASIC3.99□□□□□ -1.77
CDX1P47902 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDX1P47902 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
CDX1P47902 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDX1P47902 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.99□□□□□ -1.77
CDX1P47902 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDX1P47902 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDX1P47902 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.99□□□□□ -1.77
CDX1P47902 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.99□□□□□ -1.77
CDX1P47902 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDX1P47902 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDX1P47902 AL139811.1-201ENST00000424779 2299 ntBASIC3.98□□□□□ -1.77
CDX1P47902 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDX1P47902 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CDX1P47902 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDX1P47902 AC022893.2-201ENST00000564832 3296 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDX1P47902 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDX1P47902 DHX9P1-201ENST00000436565 3076 ntBASIC3.98□□□□□ -1.77
CDX1P47902 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CDX1P47902 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDX1P47902 RNA5SP502-201ENST00000362694 119 ntBASIC3.98□□□□□ -1.77
CDX1P47902 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.98□□□□□ -1.77
CDX1P47902 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDX1P47902 BTBD10P2-201ENST00000404779 676 ntBASIC3.98□□□□□ -1.77
CDX1P47902 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDX1P47902 RN7SKP114-201ENST00000410327 279 ntBASIC3.98□□□□□ -1.77
CDX1P47902 RNA5SP104-201ENST00000410989 118 ntBASIC3.98□□□□□ -1.77
CDX1P47902 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AL449283.1-202ENST00000418249 604 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC008280.1-201ENST00000418851 412 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC027644.1-201ENST00000419595 298 ntBASIC3.98□□□□□ -1.77
CDX1P47902 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.98□□□□□ -1.77
CDX1P47902 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.98□□□□□ -1.77
CDX1P47902 OSTCP5-201ENST00000425293 453 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.98□□□□□ -1.77
CDX1P47902 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.98□□□□□ -1.77
CDX1P47902 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.98□□□□□ -1.77
CDX1P47902 UBE2V1P1-201ENST00000430836 445 ntBASIC3.98□□□□□ -1.77
CDX1P47902 GTF2IP3-201ENST00000433887 494 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.98□□□□□ -1.77
CDX1P47902 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.98□□□□□ -1.77
CDX1P47902 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.98□□□□□ -1.77
CDX1P47902 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.98□□□□□ -1.77
CDX1P47902 Z99714.1-201ENST00000450463 807 ntBASIC3.98□□□□□ -1.77
CDX1P47902 MRPL42P4-201ENST00000453267 443 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC104164.3-201ENST00000467363 1258 ntBASIC3.98□□□□□ -1.77
CDX1P47902 RN7SL41P-201ENST00000476144 297 ntBASIC3.98□□□□□ -1.77
CDX1P47902 RN7SL826P-201ENST00000479724 288 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.98□□□□□ -1.77
CDX1P47902 AC025445.1-201ENST00000502728 300 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC097173.1-201ENST00000505862 819 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.98□□□□□ -1.77
CDX1P47902 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.98□□□□□ -1.77
CDX1P47902 RNA5SP154-201ENST00000516193 111 ntBASIC3.98□□□□□ -1.77
CDX1P47902 SCARNA1-201ENST00000517138 166 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.98□□□□□ -1.77
CDX1P47902 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.98□□□□□ -1.77
CDX1P47902 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.98□□□□□ -1.77
CDX1P47902 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.98□□□□□ -1.77
CDX1P47902 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.98□□□□□ -1.77
CDX1P47902 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CDX1P47902 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC3.98□□□□□ -1.77
CDX1P47902 NMNAT1P1-201ENST00000554095 876 ntBASIC3.98□□□□□ -1.77
CDX1P47902 EDDM3DP-201ENST00000554692 434 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC3.98□□□□□ -1.77
CDX1P47902 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.98□□□□□ -1.77
CDX1P47902 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CDX1P47902 MIR4509-3-201ENST00000578671 94 ntBASIC3.98□□□□□ -1.77
CDX1P47902 MIR4509-2-201ENST00000583920 94 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.98□□□□□ -1.77
CDX1P47902 HMGB2P1-201ENST00000591146 634 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC011487.3-201ENST00000593607 453 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC011453.2-201ENST00000603737 729 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC011458.1-201ENST00000604034 617 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC099676.1-201ENST00000608886 657 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC016597.2-201ENST00000613256 341 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC090510.2-201ENST00000617465 629 ntBASIC3.98□□□□□ -1.77
CDX1P47902 MIR4509-1-201ENST00000618224 94 ntBASIC3.98□□□□□ -1.77
CDX1P47902 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC091905.4-201ENST00000623432 202 ntBASIC3.98□□□□□ -1.77
CDX1P47902 AC087821.2-201ENST00000637086 450 ntBASIC3.98□□□□□ -1.77
CDX1P47902 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDX1P47902 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.98□□□□□ -1.77
CDX1P47902 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDX1P47902 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.98□□□□□ -1.77
CDX1P47902 AC005261.4-201ENST00000600047 1385 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms