Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-1P43699 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-1P43699 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NKX2-1P43699 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-1P43699 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-1P43699 RNA5SP391-201ENST00000363456 119 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.95□□□□□ -1.78
NKX2-1P43699 Y_RNA.472-201ENST00000384322 102 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AF228730.1-201ENST00000397972 663 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 FABP12P1-201ENST00000401911 322 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 ERHP2-201ENST00000402323 299 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 FCF1P5-201ENST00000406490 482 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AC008280.1-201ENST00000418851 412 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 MTND2P16-201ENST00000419987 799 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX2-1P43699 PDSS1P1-201ENST00000422953 1114 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AL121776.1-201ENST00000429337 372 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 AL513175.1-201ENST00000431492 780 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX2-1P43699 GTF2IP7-202ENST00000436677 309 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 CYCSP12-201ENST00000437729 300 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 PPIAP17-201ENST00000438507 471 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 EEF1A1P39-201ENST00000440791 250 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 AL357520.1-201ENST00000441557 453 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX2-1P43699 SPRYD7P1-201ENST00000443861 570 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 Z77249.1-201ENST00000444622 1175 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AC104651.2-201ENST00000447549 528 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 TCEA1P1-201ENST00000449716 880 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.95□□□□□ -1.78
NKX2-1P43699 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX2-1P43699 SETP20-201ENST00000457046 852 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.95□□□□□ -1.78
NKX2-1P43699 RPL23AP65-201ENST00000475608 468 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 VPS26AP1-201ENST00000483197 979 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-1P43699 AC105233.1-201ENST00000498840 781 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 MTND4LP2-201ENST00000502312 285 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 AC048346.1-201ENST00000510247 144 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NKX2-1P43699 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX2-1P43699 RNU6-709P-201ENST00000517257 104 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AP001207.1-201ENST00000524051 481 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AC024940.3-201ENST00000538551 316 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.95□□□□□ -1.78
NKX2-1P43699 NOP10-202ENST00000557912 436 ntTSL 2 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX2-1P43699 RN7SL176P-201ENST00000580352 264 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 MIR4310-201ENST00000582950 57 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AC008687.2-201ENST00000597865 520 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 NIFKP6-201ENST00000598115 845 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AC010857.1-201ENST00000606398 594 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.95□□□□□ -1.78
NKX2-1P43699 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AL355493.4-201ENST00000618530 292 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 MIR6837-201ENST00000620884 64 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 AC055839.1-201ENST00000634467 498 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 MTND2P41-201ENST00000637599 773 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NKX2-1P43699 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-1P43699 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-1P43699 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-1P43699 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.95□□□□□ -1.78
NKX2-1P43699 AC107081.3-201ENST00000612715 2034 ntBASIC3.95□□□□□ -1.78
NKX2-1P43699 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-1P43699 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-1P43699 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.95□□□□□ -1.78
NKX2-1P43699 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-1P43699 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-1P43699 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-1P43699 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-1P43699 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-1P43699 AC005261.4-201ENST00000600047 1385 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-1P43699 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-1P43699 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 RNU1-94P-201ENST00000362627 173 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 RNU6-839P-201ENST00000363347 108 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 RNA5SP132-201ENST00000364725 118 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 RNU6-636P-201ENST00000384598 107 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 SNORA40.2-201ENST00000390847 128 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 MIR921-201ENST00000401133 56 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms