Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.1□□□□□ -1.59
CIITAP33076 AC091178.1-203ENST00000584586 279 ntBASIC5.1□□□□□ -1.59
CIITAP33076 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.1□□□□□ -1.59
CIITAP33076 NIFKP6-201ENST00000598115 845 ntBASIC5.1□□□□□ -1.59
CIITAP33076 AC123786.2-201ENST00000603459 275 ntBASIC5.1□□□□□ -1.59
CIITAP33076 AC113368.1-201ENST00000603736 382 ntBASIC5.1□□□□□ -1.59
CIITAP33076 AC002487.1-201ENST00000604565 994 ntBASIC5.1□□□□□ -1.59
CIITAP33076 AC114878.2-201ENST00000604863 1251 ntBASIC5.1□□□□□ -1.59
CIITAP33076 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CIITAP33076 AC096553.1-201ENST00000605169 829 ntBASIC5.1□□□□□ -1.59
CIITAP33076 AL356218.2-201ENST00000605264 187 ntBASIC5.1□□□□□ -1.59
CIITAP33076 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.1□□□□□ -1.59
CIITAP33076 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CIITAP33076 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CIITAP33076 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.1□□□□□ -1.59
CIITAP33076 LINC01808-202ENST00000641680 1116 ntBASIC5.1□□□□□ -1.59
CIITAP33076 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CIITAP33076 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CIITAP33076 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CIITAP33076 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CIITAP33076 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CIITAP33076 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CIITAP33076 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CIITAP33076 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.09□□□□□ -1.59
CIITAP33076 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CIITAP33076 AL118496.1-201ENST00000440201 1812 ntBASIC5.09□□□□□ -1.59
CIITAP33076 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.09□□□□□ -1.59
CIITAP33076 ZNF849P-201ENST00000594711 1566 ntBASIC5.09□□□□□ -1.59
CIITAP33076 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CIITAP33076 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.09□□□□□ -1.59
CIITAP33076 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CIITAP33076 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CIITAP33076 RNU1-130P-201ENST00000363930 160 ntBASIC5.09□□□□□ -1.59
CIITAP33076 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CIITAP33076 RNU6-932P-201ENST00000391108 106 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.09□□□□□ -1.59
CIITAP33076 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CIITAP33076 RNU4-22P-201ENST00000411058 166 ntBASIC5.09□□□□□ -1.59
CIITAP33076 RN7SKP247-201ENST00000411094 308 ntBASIC5.09□□□□□ -1.59
CIITAP33076 Y_RNA.625-201ENST00000411256 107 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AC092638.1-201ENST00000411966 1275 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AC107081.1-201ENST00000414975 361 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.09□□□□□ -1.59
CIITAP33076 RPL22P18-201ENST00000417197 377 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.09□□□□□ -1.59
CIITAP33076 OR2X1P-201ENST00000421144 687 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.09□□□□□ -1.59
CIITAP33076 AC099336.2-201ENST00000422457 254 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.09□□□□□ -1.59
CIITAP33076 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.09□□□□□ -1.59
CIITAP33076 SETP8-201ENST00000435341 628 ntBASIC5.09□□□□□ -1.59
CIITAP33076 CR769776.1-201ENST00000441254 787 ntBASIC5.09□□□□□ -1.59
CIITAP33076 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.09□□□□□ -1.59
CIITAP33076 AC012671.1-201ENST00000451912 203 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AC092155.2-201ENST00000454675 477 ntBASIC5.09□□□□□ -1.59
CIITAP33076 GTF2IP12-201ENST00000456547 356 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AC099560.2-201ENST00000457554 255 ntBASIC5.09□□□□□ -1.59
CIITAP33076 RNU6-1218P-201ENST00000458990 108 ntBASIC5.09□□□□□ -1.59
CIITAP33076 RPL5P23-201ENST00000496040 868 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.09□□□□□ -1.59
CIITAP33076 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.09□□□□□ -1.59
CIITAP33076 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CIITAP33076 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.09□□□□□ -1.59
CIITAP33076 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.09□□□□□ -1.59
CIITAP33076 RNU6-1028P-201ENST00000517164 93 ntBASIC5.09□□□□□ -1.59
CIITAP33076 C1GALT1P3-201ENST00000522049 819 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.09□□□□□ -1.59
CIITAP33076 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.09□□□□□ -1.59
CIITAP33076 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CIITAP33076 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.09□□□□□ -1.59
CIITAP33076 AL390726.5-202ENST00000564800 256 ntBASIC5.09□□□□□ -1.59
CIITAP33076 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.09□□□□□ -1.59
CIITAP33076 RPL7P50-201ENST00000600588 727 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AP002360.3-201ENST00000607673 710 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AC097505.1-201ENST00000610199 565 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AC021755.4-201ENST00000616620 456 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AC234782.5-201ENST00000617723 324 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AC022106.2-201ENST00000620114 757 ntBASIC5.09□□□□□ -1.59
CIITAP33076 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.09□□□□□ -1.59
CIITAP33076 AP003485.2-201ENST00000623636 610 ntBASIC5.09□□□□□ -1.59
CIITAP33076 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.09□□□□□ -1.59
CIITAP33076 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.09□□□□□ -1.59
CIITAP33076 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CIITAP33076 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CIITAP33076 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CIITAP33076 AL451142.2-201ENST00000429076 2090 ntBASIC5.09□□□□□ -1.59
CIITAP33076 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.09□□□□□ -1.59
CIITAP33076 AC093311.1-201ENST00000506586 2021 ntBASIC5.09□□□□□ -1.6
CIITAP33076 AC139713.2-214ENST00000642059 1811 ntBASIC5.09□□□□□ -1.6
CIITAP33076 AC126323.6-202ENST00000568092 3511 ntBASIC5.09□□□□□ -1.6
CIITAP33076 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CIITAP33076 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CIITAP33076 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CIITAP33076 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.08□□□□□ -1.6
CIITAP33076 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CIITAP33076 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CIITAP33076 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CIITAP33076 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.08□□□□□ -1.6
CIITAP33076 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms